Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01728 ATGGCGTCGAAGCCTTCGCCTTCACCTTCTACGAGATCAGACTCATCCAAGGACCCTTCGACAAAGAGATTACAAGACACAGGTTATACCGTTAAGGATGTATCATTATTCATTGATTCCTTAAAGAAACAAGTAGCTGATGATCGGTGCATTTCCATAAAGAaaagaatggaagaaaatagACAGAAACTTGCTGGTATTACAAACCATATCTTCAAATTATCAATGGAAAGGAAAGCCTGCGGCAATACTGATACACATAGAAGTTTGGACTTACTGACAAAGATGCAAAAAGATGTAATTAACATGAACAATGGTGTTCATTCAAGTAAGGGAGATAAGGAGAGCAATGGTTTCCATGATGATGGCCATGGTTCTACAGCAGTCCTTTTAGGATCTAATGTCCCTGTGAAGAATGCTGTTCGCCCAATCAAGCTTCCAGAAGTAAGAAAGTTACCAACGTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACGGAGGATCAATCAGTAGTTGGTCGAAGGCGAATATATTATGACCAAACTGGTGGTGAAGCACTTATATGCAGTGACAGTGAGGAGGAAATAGttgaggaagaagaggagaaaaaagattttgttgaaTCTGAAGAATACATACTTCGCACAACTGTCAAAAATTTTGGTATGTCTGATCTTGTTCTGGATTCACTGGCTCAGTGTTTTTCTAGAAACACTAGTGAAGTGAAGGCAAAATGTGAAAGTCTTAGCAGTGAAGACATCTCTGGTGGGGGTTCAAAGGATGGGGATGCTGAAGAGAATCCACAAAGTGGAAATTCTTTTATGGATAAAGATCTTGAAGCAGCACTTGATTCATTTGACAACCTCTTTTGCCGACGATGTCTTGTTTTTGATTGCAGATTACATGGATGTTCACAGGATCTTGTCTTTTCTGCTGACAAACAAGCTGTGTGGACCCCTCCTGATGTggaaaataaaccatgcggcCCAAATTGCTTTCAATTGGCACTGAAGTCTGAAAGGTTTGCAAAAATGACATCTGCTCTGGGTGATGTTGAGGACAAGTGCTCTGGTGGTGCTGGTCTGCAAATATCATCTAGGAAGAAGTCTTCTGGTCCAACTGCTAGGAGACGGTTAAAGTCCAGCCAAAGTGAAAGTGCTTCATCCAATGCAAAGAACATATCTGAAAGTAGTGACTCAGAGAATGGTCCTGGACAGGACACTGCTTCAGCCTCCCTCTCAACGCCACATAAAAGTAAACCTGTGAGGAAAGGTGGAGTTGGTAAGAGGAACAGTAAGCGAGTGGCGGAACGCGTCCTTGCTTCCATGCATAAGAGGCAGAAGAAAACTGTGGCATCTGATTCTGATTCTGtgGGTGAAGCTCTTGATCGCTCGTCAAATGAGATAGTTACTGATCCACCTGTCACTGGGCTTCTAGAGAAAGGGTTGGAAATTTTTGGTAGAAACAGCTGTTTAATAGCAAGGAATCTTTTAAATGGTCTGAAGACCTGTTGGGAGGTTTTTCAATACATAAATTGCAATGAAGGAAAGATGTCTGGCCCTGCTGGTGATGCTGCAAATTCCCTTGTGGAAGGCTATTCCAAGGGTAACAATGAAGTGAGACGGAGATCAAGATTCTTACGTAGACGGGGGAGAGTTCGTCGCTTAAAGTATACTTGGAAATCCGCTGCTTATCATTCTATTAGGAAAAGGATTACAGAGAGAAAGGATCAACCCTGCCGACAGTATAATCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACATGCTGTGAGAAGTACTGTGGATGCCCCAAAACTTGCAAGAATCGGTTTCGAGGTTGTCATTGTGCTAAAAGTCAATGTCGAAGTAGGCAATGTCCTTGCTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTCAGTTGTGGTGACGGTTCTCTTGGAATTCCTAGCCAAAGAGGGGACAATTATGAATGTAGAAATATGAAACTTCTTCTCAAACAACAGCAAAGGGTGCTTCTGGGAAGATCTGATGTATCTGGCTGGGGAGCCTTCTTAAAGAATAGTGTCGGGAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCACACCGGGAAGCAGATAAGCGCGGAAAGATATATGACCGTGAGAATTCATCATTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCATTCCGGAAAGGTGACAAATTGAAGTTCGCTAACCATTCTCCGGATCCAAATTGTTATGCGAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGCATTTTTGCCAAGGAACGGATCAATGCTGGGGAGGAACTCTTCTATGATTATCGTTACGAGCCAGATAGAGCTCCTGCCTGGGCTAGGAAGCCTGAGGCATCTGGATCCAAAAAAGATGACGGTGCTCCTTCTAGTGGTCGTGCCAAGAAGCTTGCTTA 2504 0.4161 MASKPSPSPSTRSDSSKDPSTKRLQDTGYTVKDVSLFIDSLKKQVADDRCISIKKRMEENRQKLAGITNHIFKLSMERKACGNTDTHRSLDLLTKMQKDVINMNNGVHSSKGDKESNGFHDDGHGSTAVLLGSNVPVKNAVRPIKLPEVRKLPTYTTWIFLDRNQRMTEDQSVVGRRRIYYDQTGGEALICSDSEEEIVEEEEEKKDFVESEEYILRTTVKNFGMSDLVLDSLAQCFSRNTSEVKAKCESLSSEDISGGGSKDGDAEENPQSGNSFMDKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFSADKQAVWTPPDVENKPCGPNCFQLALKSERFAKMTSALGDVEDKCSGGAGLQISSRKKSSGPTARRRLKSSQSESASSNAKNISESSDSENGPGQDTASASLSTPHKSKPVRKGGVGKRNSKRVAERVLASMHKRQKKTVASDSDSVGEALDRSSNEIVTDPPVTGLLEKGLEIFGRNSCLIARNLLNGLKTCWEVFQYINCNEGKMSGPAGDAANSLVEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKTCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGSLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAFRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEASGSKKDDGAPSSGRAKKLA 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01728 834 MobiDBLite consensus disorder prediction 362 435 - -
Bva11g01728 834 MobiDBLite consensus disorder prediction 808 834 - -
Bva11g01728 834 ProSiteProfiles SET domain profile. 685 800 IPR001214 GO:0005515
Bva11g01728 834 SMART set_7 685 806 IPR001214 GO:0005515
Bva11g01728 834 ProSiteProfiles CXC domain profile. 571 670 IPR026489 -
Bva11g01728 834 Coils Coil 191 212 - -
Bva11g01728 834 MobiDBLite consensus disorder prediction 1 15 - -
Bva11g01728 834 MobiDBLite consensus disorder prediction 252 277 - -
Bva11g01728 834 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 834 IPR025778 GO:0031519
Bva11g01728 834 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 25 463 - -
Bva11g01728 834 SMART CXC_2 619 656 IPR033467 -
Bva11g01728 834 Gene3D SET domain 585 802 IPR046341 -
Bva11g01728 834 Pfam CXC domain 623 654 IPR041355 -
Bva11g01728 834 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 479 832 IPR045318 GO:0006338|GO:0018024
Bva11g01728 834 SUPERFAMILY SET domain 586 803 IPR046341 -
Bva11g01728 834 MobiDBLite consensus disorder prediction 808 827 - -
Bva11g01728 834 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 479 832 - -
Bva11g01728 834 MobiDBLite consensus disorder prediction 1 26 - -
Bva11g01728 834 Pfam SET domain 696 799 IPR001214 GO:0005515
Bva11g01728 834 MobiDBLite consensus disorder prediction 365 419 - -
Bva11g01728 834 CDD SET_EZH 685 801 - -
Bva11g01728 834 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 25 463 IPR045318 GO:0006338|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01728 Bva-Chr11 15522045 15529182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01728 674 803 C2H2 Transcription Factor Family AT2G23740 27.211 1.33e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva11g01728 SET 1.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01728 - K11430 gmx:100809840 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01728 11 15522045 15529182 Bva11g01728 11 15522045 15529182 ECH