Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01717 ATGGATGTGGACATAGTGAAAACCTCTTCAGCAGGGGACAGCAGCATGGACATGATGGCAATGATGATGCAAATGGAAAAGTTCCCTGAATTCTGTGAACCTCTTTATAACACTCCCACTTACCCAGAAACCGATTTCTTGGGTAATGGAAGTGGAAGTTCCACCAGCATTACTACCACCACTCTGCCCATATTCCAAAACCCAACTTTGATTAATCCTCCGCTACCTTGCTCTGCTAATTTCCTTAACAGTCCAATTCAGCAGCCCACTACACCTCCCCTTCTACCCAATGAGATTCCACTGAGACTCAAGAATCCCAACGCTTTATCATTTCCCCACCCATCATCATCAGAGAATAGAAATTCTATGGCAGCCATGAGAGAAATGATATTCCGTATAGCAGTGATGCAACCGATACATGTTGACCCAGAATCTATTAAGCCACCGAAAAGACGAAACGTGAAGATTTCAAAGGACCCACAGAGTGTTGCAGCGAGGCACAGAAGGGAAAGGATAAGTGAGAGGATAAGGATTCTTCAGAGATTAGTTCCCGGTGGAACCAAAATGGACACAGCTTCCATGTTAGACGAAGCCATACATTACGTTAAGTTCTTGAAGAAACAGGTGCAGACACTGGAACAAGCAGGGACTAGTAGGCCAGTGAGTGTTGGTTTTCCGGCGATTTCCAACGTTAATGCCAATGTGAATTATTCTAATCTTGTCAAAGGTTTACAACCTTCTCATCATCAAATGCTGGGTTCTATGCAAATGCTCAGCTG 779 0.4416 MDVDIVKTSSAGDSSMDMMAMMMQMEKFPEFCEPLYNTPTYPETDFLGNGSGSSTSITTTTLPIFQNPTLINPPLPCSANFLNSPIQQPTTPPLLPNEIPLRLKNPNALSFPHPSSSENRNSMAAMREMIFRIAVMQPIHVDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGTSRPVSVGFPAISNVNANVNYSNLVKGLQPSHHQMLGSMQMLS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01717 259 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 253 IPR045843 GO:0003700|GO:0006355
Bva11g01717 259 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 215 IPR036638 GO:0046983
Bva11g01717 259 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Bva11g01717 259 Gene3D - 155 220 IPR036638 GO:0046983
Bva11g01717 259 PANTHER TRANSCRIPTION FACTOR HEC2 1 253 - -
Bva11g01717 259 SMART finulus 162 211 IPR011598 GO:0046983
Bva11g01717 259 Coils Coil 195 215 - -
Bva11g01717 259 CDD bHLH_AtIND_like 157 213 - -
Bva11g01717 259 Pfam Helix-loop-helix DNA-binding domain 165 205 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01717 Bva-Chr11 15465312 15466091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01717 13 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 50.000 2.13e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva11g01717 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01717 - - gmx:100805427 267.7