Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01688 ATGCGTTGGTTGCCCAACATTTCCTTCTACCAGTCTAATTCTTCTTCCACCCTCAAATGCTATACcccctttttctcttctcccgtCGACGATGCTGGCCacccaaagaagaaaaccGGTGATGGTACTCGTAGGACTGCTGGCGGCCGTGGTACCTCTGGCTGGCTTTGGGGTGTTGGTAAGAAGTCTAGCCGGGCCAAGAAGCTGCGTCCTATAGGTGAACATGATGGCAAGTCCCCTCCGAGGTCGTGGCAAGACTTGGAGGATGACAATCTTATGCCTTCGACTTCGACTAGCTCTTATGACCGCACCTACCTTACACCCTCCTCCTCTTCCTCATCATCTTCTGTTGCACCTCAGCCCCTGCCCTTGCCCGAACCCTTACTTCGCCAGAAAGACGGTGATTGCCCTCTCCCTTCGCCTGAATATGTACACGCCCCAACCACCACGACAGCCTCAAACAGACCTATTGTCGCTCTCGATGGAATCACTCCTGGCTTTCGGATGCGGAGTGTCTTTGCCGTTCAAGACACGAGGAGAAATATGGAGCAATCATCTAGGGTGGTGAATCAAGACCTGCGTGGTTCTGAAAACGCTCGTGATAACTCTAGGAGTGCTCCGACTAGTCCTTTTGCCAGTCCAAAAACAGTGGGCTCACAGAAAGTGGGAACTGGTGATTTTGTGCCTTATCACTATGTGCGTCCCCAAGGAAATCAATTCTGGTCTGCACCAGAGATGCCCGTCTCAGAAGTCTCAGCATGGCAGACACCTCCTGCATTCTTTGATTTAACTGCACTAGGCCCTGATAACTCTCCCCATCATAGTTCACCGGGGTTAAGTCCTCTGCCAAATCCCAGAAGCCCTAGTATACCTTCATCACCAATAGATCCGAGGTTATCCCTGGAGGTACGTCGTGACAATAATGGCCCTGTCAACGTTCACCCATTACCCCTGCCTCCTGGGGTAGGCTTGCCTTCACCATCTCATAACTATTCCCAAGCTTTGCCTAAGTCTGACTCCCTGCCATTGAAAAGCCAATGGCAGAAAGGCAAACTCATTGGGCGTGGTACATTTGGAAGTGTTTATGTTGCCACCaatagGGAAACTGGAGCATTATGTGCGATGAAGGAAGCAGAATTATTTCCTGATGATCCTAAATCTGCAGAGTGTATAAGACAGTTAGAGCAGgAAATTAAACTTCTTAGCCAGCTGAAACATCCAAACATTGTGCAGTATTATGGTAGTGAAATAGTGGATGACcggttttatatttatctggAATATGTCCATCCTGGTtccattaataaatatgttcGTGAACATTGTGGTGCCATGACAGAATCGGTTGTACGAAATTTCACTCGCCATATCCTTTCTGGATTGGCTTATCTGCATAGCAAAAAGACAATTCATAGGGACATCAAAGGGGCTAACCTGCTTGTTGATTCTGCTGGGGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCATCTAACTGGACATGCAGCTGATCTATCTTTGAAGGGAAGTCCATATTGGATGGCTCCAGAGCTTATGCAAGCAGTGATGCAAAAGGATAACAGCTCTGATCTAGCACTTGCAGTTGATATTTGGAGTTTGGGTTGTACAATCATTGAAATGTTAACAGGGAAGCCTCCTTGGAGCGAGTATGAAGGAgCTGCAGCCATGTTTAAGGTTATGAGGGATACCCCTCCTATACCTGAAACGTTGTCATCGGAGGGTAGAGATTTCCTGAGATGCTGCTTTACAAGAAACCCAGCAGAGAGAGCAACTGCTGCAGCTTTACTAGAACATCAATTCTTGAGAAACTCGCAACAGATAGATGTCCCATCTTCCGCCCAGCCATTTAGTGCAATGACTTCGAtgGATAAACCTCCTAGTTCCACTCCCAGAGGGAACCTTGAAAATAAACCGGATCAGTTGCCTATTCACAGTGTGCAAATTGCAAAAGTGAAGGCCAATGACAGTGGCATCGCACCGCTCTCCTCGCTCTACCCTTG 2021 0.4621 MRWLPNISFYQSNSSSTLKCYTPFFSSPVDDAGHPKKKTGDGTRRTAGGRGTSGWLWGVGKKSSRAKKLRPIGEHDGKSPPRSWQDLEDDNLMPSTSTSSYDRTYLTPSSSSSSSSVAPQPLPLPEPLLRQKDGDCPLPSPEYVHAPTTTTASNRPIVALDGITPGFRMRSVFAVQDTRRNMEQSSRVVNQDLRGSENARDNSRSAPTSPFASPKTVGSQKVGTGDFVPYHYVRPQGNQFWSAPEMPVSEVSAWQTPPAFFDLTALGPDNSPHHSSPGLSPLPNPRSPSIPSSPIDPRLSLEVRRDNNGPVNVHPLPLPPGVGLPSPSHNYSQALPKSDSLPLKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEAELFPDDPKSAECIRQLEQEIKLLSQLKHPNIVQYYGSEIVDDRFYIYLEYVHPGSINKYVREHCGAMTESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHAADLSLKGSPYWMAPELMQAVMQKDNSSDLALAVDIWSLGCTIIEMLTGKPPWSEYEGAAAMFKVMRDTPPIPETLSSEGRDFLRCCFTRNPAERATAAALLEHQFLRNSQQIDVPSSAQPFSAMTSMDKPPSSTPRGNLENKPDQLPIHSVQIAKVKANDSGIAPLSSLYP 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01688 673 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 657 - -
Bva11g01688 673 ProSiteProfiles Protein kinase domain profile. 347 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01688 673 MobiDBLite consensus disorder prediction 89 119 - -
Bva11g01688 673 SMART serkin_6 347 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01688 673 MobiDBLite consensus disorder prediction 622 648 - -
Bva11g01688 673 MobiDBLite consensus disorder prediction 67 85 - -
Bva11g01688 673 MobiDBLite consensus disorder prediction 622 642 - -
Bva11g01688 673 MobiDBLite consensus disorder prediction 29 150 - -
Bva11g01688 673 MobiDBLite consensus disorder prediction 262 338 - -
Bva11g01688 673 SUPERFAMILY Protein kinase-like (PK-like) 334 634 IPR011009 -
Bva11g01688 673 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 657 - -
Bva11g01688 673 MobiDBLite consensus disorder prediction 278 292 - -
Bva11g01688 673 MobiDBLite consensus disorder prediction 178 220 - -
Bva11g01688 673 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Bva11g01688 673 Gene3D Transferase(Phosphotransferase) domain 1 344 637 - -
Bva11g01688 673 Pfam Protein kinase domain 348 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01688 Bva-Chr11 15274729 15279275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01688 151 649 MAP Kinase Kinase Kinase AT5G66850 60.338 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva11g01688 Pkinase 2.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01688 - - cam:101502514 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00633 08 3299055 3303477 Bva11g01688 11 15274729 15279275 BWGD