Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01685 ATGGAATTGAGCTTGGATTTGTCTTTGGCCTTTGTCCCCAAAACTGTTTCTGAGTTCCTTGGTGAAGTTTCCAGGAGCAGGGACAGGTCTGAGAAATTATCGATGCTTGATGACTATGTGAAAAGATTGGAAGATGAAATGAGGAAAATTGATGCCTTTAAACGTGAGCTTCCTCTTTGCATGCTTCTCGTAAACGATGCTATAACGAGATTGAAGGAGGAAACAGCGCGGTGCATGGAAATGCAAGATCAACCTGtaattgaagaatttataCCGTTATCATCAAAAGCAAGTTCGGGAGAAAATGGGCAGTTGAGCATGGGAAAGGATAGCTGTGAGAAGAAGAATTGGATGAGCTCTGTTCAGCTATGGAGCACTGAAACCAAAACGAGAAATGGACAAGACGACCAGTCAGTGCCAGAGAACCCAATTCAAGCACATAATCGGGAAAAAGAGGGAGGGGCAATTCCCAGCCTTTTTTTTATGACTCCAATGTCTGAATTGAATCACAGCAATTCAAAATCTGGCAGCCGAGGAAGTTGTGGTTCGTCTTTGCTAACACAAGCACAGCATCTGCAACAGACTGCAAGAAAGCAAAGGCGATGCTGGTCTCCTGAGCTTCATCGGCGTTTTGTTGATGCGCTTCAACAGCTAGGAGGAGCACAAGTGGCCACTCCTAAACAGATTAGAGAACTAATGCAGGTGGATGGCCTGACAAATGATGAAGTGAAAAGCCATTTGCAAAAATACAGACTTCATGTTAAAAGGGTTGCCCCAACAAATGGCTTGTGGATGGCCCAAGATCACTGTGAAGATAAATCAAAGGGGAAGTTATCACAGTCTGGTTCCCCAGAAAGCCCTCTTCTTCTAGGAGGGTCCGCTAAAGGTTTCTCCTGCTCAGGACGCAGCAGCATGGATGCAGAAGATGACGAGAAATCAGAATGCCACAGTTGGAAAGGTGGGCTTCACCACAAATCAGAAGCTGCTGATGTCTTGTCATA 1001 0.4476 MELSLDLSLAFVPKTVSEFLGEVSRSRDRSEKLSMLDDYVKRLEDEMRKIDAFKRELPLCMLLVNDAITRLKEETARCMEMQDQPVIEEFIPLSSKASSGENGQLSMGKDSCEKKNWMSSVQLWSTETKTRNGQDDQSVPENPIQAHNREKEGGAIPSLFFMTPMSELNHSNSKSGSRGSCGSSLLTQAQHLQQTARKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHVKRVAPTNGLWMAQDHCEDKSKGKLSQSGSPESPLLLGGSAKGFSCSGRSSMDAEDDEKSECHSWKGGLHHKSEAADVLS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01685 333 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 327 - -
Bva11g01685 333 MobiDBLite consensus disorder prediction 273 333 - -
Bva11g01685 333 Gene3D - 197 254 - -
Bva11g01685 333 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 253 IPR006447 GO:0003677
Bva11g01685 333 Pfam Myb-like DNA-binding domain 200 251 IPR001005 -
Bva11g01685 333 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 327 IPR044787 GO:0003700|GO:0006355
Bva11g01685 333 MobiDBLite consensus disorder prediction 304 333 - -
Bva11g01685 333 Coils Coil 64 84 - -
Bva11g01685 333 Coils Coil 36 56 - -
Bva11g01685 333 SUPERFAMILY Homeodomain-like 195 256 IPR009057 -
Bva11g01685 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 255 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01685 Bva-Chr11 15258257 15260261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01685 1 248 G2-like Transcription Factor Family AT4G37180 44.944 2.37e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva11g01685 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01685 - - pvu:PHAVU_002G021400g 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01685 11 15258257 15260261 Bva08g00638 08 3321219 3322978 BWGD