Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01672 ATGCCGTCGGAATCCAGCGAGAATCGACGAGCGGCCAAGACCCAACACCCGGGAGCTCCACCGCCGGAACAAGAGCATCTCCCATGCCCTCGTTGCGACTCCACTAACACCAAGTTCTGCTACTATAACAACTACAACTTCTCTCAGCCTCGTCACTTCTGCAAGTCCTGCCGCCGGTACTGGACTCATGGCGGCACCCTTCGTGACATCCCCGTCGGCGGTGGCAGTCGCAAAAACGCCAAGCGCTCCCGTACTTGCTCtgcaacttcttcttcttccacgACTGTCACTTCAGGTTCAGCTCAGGAGCAACCATTGGGCGCGACCCCTGTATTAGTGCCTATTGCTGCCAACCAAGGAGCAGCTATGCAGTTCGCTGCTACTGGTGGCATTGATGGGGATGGCAAGCCAAACATGAATATATGTGGAAGCTTCACTTCGTTGCTCAATAATACTCAAGCTCCTAGCTTTCTTGCTCTAGGCGGTTTCGGAATGGGGCTTGGACATGGGCTTGAAGATATGGGATTTGGGATTGGAAGAGGGGGTTGGCCTTTTCCCGGGACGGTAGATGGTAGTGGTAACGCTGCCGGCGGTGTTGGGGTCCCTGGGGTTGGCAATTCATGGCAATTAGAGAGTGGAGAAGGTGGATTTGTTGGCGGAGACTGTTTCTCTTGGCCGGGGCTAGCGATTTCAACACCTGGAAATGGTCTGAAATG 716 0.5307 MPSESSENRRAAKTQHPGAPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTCSATSSSSTTVTSGSAQEQPLGATPVLVPIAANQGAAMQFAATGGIDGDGKPNMNICGSFTSLLNNTQAPSFLALGGFGMGLGHGLEDMGFGIGRGGWPFPGTVDGSGNAAGGVGVPGVGNSWQLESGEGGFVGGDCFSWPGLAISTPGNGLK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01672 238 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 235 - -
Bva11g01672 238 ProSiteProfiles Zinc finger Dof-type profile. 27 81 IPR003851 GO:0003677|GO:0006355
Bva11g01672 238 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 235 IPR045174 GO:0003700|GO:0006355
Bva11g01672 238 MobiDBLite consensus disorder prediction 80 104 - -
Bva11g01672 238 Pfam Dof domain, zinc finger 25 81 IPR003851 GO:0003677|GO:0006355
Bva11g01672 238 MobiDBLite consensus disorder prediction 68 104 - -
Bva11g01672 238 ProSitePatterns Zinc finger Dof-type signature. 29 65 IPR003851 GO:0003677|GO:0006355
Bva11g01672 238 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01672 Bva-Chr11 15199321 15200554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01672 1 238 C2C2-Dof Transcription Factor Family AT3G50410 50.775 4.65e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva11g01672 zf-Dof 3.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01672 - - qsu:112038043 324.324