Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01650 ATGTCCCAAGATTATCACCAAGGAATCTTCAGCTTCTCGAATAATGGATTCGAGAGATCAACTGTAACTCACCAAGACCACCATCCACCGCAGCCGCAGCAACACTTAGTCCAACAGATCCGGAGAGTAGACAAAGCGAGGGTGCAAGGCTTCGACACGCCACCACCCCCGCCATTAGTGGGTATTGAAGAAGAGGAATCTGGAAGCCTTCCTGTGTATGAAACTGCAGGGATGTTATCGGAGATGTTTAATTTCCCTACAGCCGGCGCCACCGCCGCTGAATTGTTGGAACAACCCATGACCGCCACGTATCGGTCCACGTCAAGGCCACAACCGGTGGAGTGGTACGGGAACAGACAAGGAGGAGGGATCATTACTGGTTTGGGGGATTCAAAGAACTCTCAGAATAGTGTGAACAACCGCGGTGAtagcatagttcaccatcatCATCAGATTTCAAACATTAATGCAGACTCAGCTGCTGCCATGCAGCTTTTTCTCATGAATCCACAAACAAGATCGCCTTCTCCACCTACTACTAATCATACTCCTGCAACTGCTTCTTCCACACTCCACATGCTGCTTCCCAATCCTTCCACCTCTCTTCAAGGCTTCACAGGTTCAGGACCGGGAGGGGGTTTTGGTCAATTCACATGGGTTCCGGATAGTGCTCAGGAAGGAGGCACACCCACTGGCTCCCAACTCAACAGCAATCCACCTGAAATTGGAGGCAGGGTTGTGGAAGGTCAAGGTCTTTCGTTATCATTGTCTTCCTCGTTACAACACTTGGAAGCAGCGAAAGCCGAGGAATTGAGGATGGGAGAGACCGGGTTTTTGTATTACAATCAAGGTGCTGGTGCTGGAGGGTCTTCTGCTTCACAGTATCCGTACAAGAATTTTGCAAATCATAACCAACCATCGCATTTACAGGGAGCAATAGGACAGAACCACCAGGCTCATGTTGGATTCGGGTCATCTATAGGTGTAGTGAATGTGCTGAGAAATTCCAAGTATGTGAAAGCTGCTCAAGACTTGCTCGAAGAATTCTGCAGTGTCGGGAGAGGCCAGTTCAAGAAGAACAAGTTCTCTAGGCAGAACTCAAACCCTAATTCGAATTCTGGTGCTGGGGGTGGAGCTGGTGCTTCTTGGTCTTCAAAAGATCTTCCTCCTTTGTCAGCAGCTGATAGGATTGAGCATCAAAGAAGGAAGGTCAAGCTTCTATCCATGCTTGACGAGGTGGATAGAAGATATAACCACTACTGCGAGCAAATGCAAATGGTTGTGAACTCGTTTGACTTGGTGATGGGCTTTGGGGCGGCGGTGCCATACACGGCGCTGGCACAGAAAGCAATGTCTCGGCATTTCCGGTGTCTGAAGGATGCGATATCAGCGCAGCTGAAGCATAGCTGCGATTTGCTAGGGGAGAAAGATGGTGCAGGAACATCAGGTTTGACGAAGGGAGAGACCCCTAGGCTTAAGATGCTAGAGCAAAGCCTAAGGCAGCAGAGAGCCTTCCATCAGATGGGTATGATGGAACAGGAAGCCTGGAGACCTCAGAGAGGTTTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTTCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCGAGACAGACTGGGCTATCGAGAAATCAGgtATCAAACTGGTTCATTAATGCTAGGGTTCGATTGTGGAAACCTATGGTGGAAGACATGTACCAACAAGAACTTAAGGAGGCAGAGGGtgcagaagagagagaaggggacCAAAGCAACAGCAATAGTGGCAACCTCGCACAAACTACAACCACCGCAGCAACAGCATCAACAGCAACAGCGCCACCACCACCAACAACTCCCAAAACAGGTAAAAGATCCGATACCAATGCTGCCGAAAGCGACCCTTCACTCTTTGCAATCAATAGACAAGCCTTCTCGGAAAACCAAGCAAAACAGTCAAGCTCCTCCACCACCATTATGGCTCCCAATTCTATTTCCACCACCAACGCCACCACCTCAGAGGTGGCGCCACCAGTGTCTCAGTCCTTCGACTCAGACATACCAATCCACAGATCAATAACGAAGGATGACACGCGTCGTCATGACAGCTTGGTTTCTGCGGACTATGGGACCACCTCTGCTACTGCTGACATTGGATCAACACTTATTAGATTTGGGACCACTACCGCCGGTGATGTGTCACTCACTCTAGGGCTACGCCATGCCGGAAACATGCCTGAGAAAACTCCTTTCTCAGTTAGAGACTTCGGAGGCATTTA 2306 0.4857 MSQDYHQGIFSFSNNGFERSTVTHQDHHPPQPQQHLVQQIRRVDKARVQGFDTPPPPPLVGIEEEESGSLPVYETAGMLSEMFNFPTAGATAAELLEQPMTATYRSTSRPQPVEWYGNRQGGGIITGLGDSKNSQNSVNNRGDSIVHHHHQISNINADSAAAMQLFLMNPQTRSPSPPTTNHTPATASSTLHMLLPNPSTSLQGFTGSGPGGGFGQFTWVPDSAQEGGTPTGSQLNSNPPEIGGRVVEGQGLSLSLSSSLQHLEAAKAEELRMGETGFLYYNQGAGAGGSSASQYPYKNFANHNQPSHLQGAIGQNHQAHVGFGSSIGVVNVLRNSKYVKAAQDLLEEFCSVGRGQFKKNKFSRQNSNPNSNSGAGGGAGASWSSKDLPPLSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAISAQLKHSCDLLGEKDGAGTSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGAEEREGDQSNSNSGNLAQTTTTAATASTATAPPPPTTPKTGKRSDTNAAESDPSLFAINRQAFSENQAKQSSSSTTIMAPNSISTTNATTSEVAPPVSQSFDSDIPIHRSITKDDTRRHDSLVSADYGTTSATADIGSTLIRFGTTTAGDVSLTLGLRHAGNMPEKTPFSVRDFGGI 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01650 768 MobiDBLite consensus disorder prediction 598 621 - -
Bva11g01650 768 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 57 757 - -
Bva11g01650 768 SUPERFAMILY Homeodomain-like 518 583 IPR009057 -
Bva11g01650 768 ProSiteProfiles 'Homeobox' domain profile. 513 576 IPR001356 GO:0003677
Bva11g01650 768 Pfam Associated with HOX 332 463 IPR006563 -
Bva11g01650 768 Gene3D - 519 581 - -
Bva11g01650 768 SMART HOX_1 516 580 IPR001356 GO:0003677
Bva11g01650 768 CDD homeodomain 516 577 IPR001356 GO:0003677
Bva11g01650 768 MobiDBLite consensus disorder prediction 360 379 - -
Bva11g01650 768 MobiDBLite consensus disorder prediction 360 384 - -
Bva11g01650 768 SMART prehox3 327 464 IPR006563 -
Bva11g01650 768 MobiDBLite consensus disorder prediction 588 640 - -
Bva11g01650 768 Pfam Homeobox KN domain 533 572 IPR008422 GO:0003677|GO:0006355
Bva11g01650 768 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 57 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01650 Bva-Chr11 15092803 15099592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01650 1 563 Homeobox Transcription Factor Family AT4G36870 51.085 3.76e-149 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bva11g01650 POX 2.4e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01650 - - jre:108995343 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00683 08 3521264 3528456 Bva11g01650 11 15092803 15099592 BWGD