Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01648 ATGGCAAGAGGGTCTTTAAACATGGACCAGGCGGAATTAAGCACTGAACAGGTTCTAAGGAGGGATATCCCATGGGAGACGTACATGACGACTAAGCTGATCTCCGGCACAAGCCTTCAGCTTTTGAGGCGTTATGATCATAGATCAGAAAGTCATAGAGCACAGTTGCTGGATGatGATGGTCCAGCTTATGTACGCGTATTTGTTCGTGTCTTACgtgatatttttaaagaagagACTGTAGAATATGTTCTGGCATTAATAGATGAAATGCTTACCGCAAACCCCAAAAGAGCAAGACTGTTTCATAACAGCTCACTTGCGGATGAAGATACTTATGAACCTTTCTTAAGGAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTAATAGTTAGTGCCAGGCCAAGAAATCAGAATGGCATTGTTTCAAAAGGAGAAGCATCCAACTCAAAGAAACCGTTTACTACTATTGAGGATGTTCTGAAAGGATTGGTAGAATGGCTTTGTGCACAGcTGAAGAAACCTTCTCATCCAAGTCGTGGTGTACCAACTGCTATCAATTGCTTCGCAACTCTACTTAAGGAACCTGTGGTCAGGTCGTCCTTTGTTGGAGCAGATGGGGTCAAGTTGCTTGTACCTTTGATTTCTCCAGCATCCACCCAACAGTCTATGCAGCTCCTTTATGAAACTTGTCTTTGCATTTGGCTCTTGTCCTATTATGAACCGGCTATTGAATACTTGGCTACTTCTAGAGCCCTTCCGCGACTTATTGATGTTGTTAAGAGTTCTACAAAAGAGAAGGTTGTTAGAGTTGTTGCCTTGACCTTTAAGAACTTGCTGTCGAAAGGGACATTGGGTGCTCAAATGGTTGACCTTCAACTGCCACAAGTTGTTCAGAGTTTGAAGGCACAAGCATGGAGTGATGAGGACTTATTGGAGGCGCTGAATTACCTGGAAGAAGGACTTAAGGATAACATCAAGAAACTAAGCTCTTTTGATAAGTATAAGCAAGAAGTTCTACTTGGCCATCTGGATTGGTCTCCCATGCACAAAGATCCTATATTTTGGCGGGAAAACGTCACCAACTTTGAAGAGAACGACTTCCAGATTCTAAGGGTCCTAATAACAATTTTGGACACGTCTAGTGATCCAAGGACACTGGCTGTTGCTTGTTTTGACCTTTCACAGTTCATCCAGTGCCATTCTGCTGGGAGGATCATTGCGACAGATCTCAAAGCCAAGGAACGAGTGATGAAACTTATGAATCATGAGAACGCTGAGGTTACAAAGTATGCACTGCTTTGCATCCAACGGCTTTTCTTAGGTGCAAAGTACGCAAGCTTCTTGCAGGCTTA 1364 0.4238 MARGSLNMDQAELSTEQVLRRDIPWETYMTTKLISGTSLQLLRRYDHRSESHRAQLLDDDGPAYVRVFVRVLRDIFKEETVEYVLALIDEMLTANPKRARLFHNSSLADEDTYEPFLRNWFIQEKSCKILALIVSARPRNQNGIVSKGEASNSKKPFTTIEDVLKGLVEWLCAQLKKPSHPSRGVPTAINCFATLLKEPVVRSSFVGADGVKLLVPLISPASTQQSMQLLYETCLCIWLLSYYEPAIEYLATSRALPRLIDVVKSSTKEKVVRVVALTFKNLLSKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNYLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDPIFWRENVTNFEENDFQILRVLITILDTSSDPRTLAVACFDLSQFIQCHSAGRIIATDLKAKERVMKLMNHENAEVTKYALLCIQRLFLGAKYASFLQA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01648 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 8 454 - -
Bva11g01648 454 PIRSF V-ATP_synth_H 3 453 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bva11g01648 454 Pfam V-ATPase subunit H 331 443 IPR011987 GO:0000221|GO:1902600
Bva11g01648 454 Pfam V-ATPase subunit H 12 325 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bva11g01648 454 SMART arm_5 243 284 IPR000225 GO:0005515
Bva11g01648 454 SMART arm_5 197 242 IPR000225 GO:0005515
Bva11g01648 454 SMART arm_5 404 444 IPR000225 GO:0005515
Bva11g01648 454 Gene3D - 345 446 IPR038497 -
Bva11g01648 454 SUPERFAMILY ARM repeat 15 444 IPR016024 -
Bva11g01648 454 Gene3D - 7 333 IPR011989 -
Bva11g01648 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 8 454 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01648 Bva-Chr11 15066921 15071466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01648 8 454 Primary Pumps ATPases(2) AT3G42050 79.204 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01648 K02144 - gmx:100788723 811.601