Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01646 ATGATATCAATGGCAGTCTCCATCCTTCCATTTCCATCACATGCCCTGTTCTTTGCACTGATACTTTTTTCCATCTCCCATATCTCAACTCAATCATCAGGAACGAACTTTTCATGCCCTGCAGACGAAGCTTCAGTTTCTCCCTGTGACACCTACGTGACATACTTTGCTAAGTCCCCGAATCTGTTGAGTCTGACAAACATATCTGATTTATTTGGCATCAGTCCCTTATCAATAGCAAGAGCAAGTAACTTAACAGAAGCCGATAGTATCCAGCTGATTCCTGGCCAACTCTTACTGGTGCCAGTCAGTTGTGGTTGCACTGGAAATCGCTCTTTTGCTAATAATACCTACGAAATCAAGTCAGGTGATAactatttctttgtttcaaccaCTTTATTTGAGAATCTCACCAATTGGCATGTAGTGGAAGAATTGAACCCCTCTCTAAATCCAAATCTCTTGCAAATAGGCGTTAAAGTAGTCTTTCCTTTGTTCTGCCGCTGCCCTTCAAAGCAGCAGTTAGCCAAAGGGATTACAAATCTGATTACATATGTGTGGCAACCCAGTGATAATGTTGCCCTCGTTAGTGCAAAGTTTAATGCATCGGCAACGGACATAATGGCTGAAAACAACTACCAGAACTTCACCAGTGCAGTTTACCAGCCACTTTTTATCCCAGTGACACAGTTGCCGGATCTTTCTCTACCTCCTTCTAATAAAACAAAGCACAACAATCCTTTCGGGGTTATTCTTGGTGTCAGCCTCGGTTGCACTCTTCTGATTGCTCTTTTAGCAACGTCACTAGTTTATCTTTACTgtctgagaaagaaaaagacgaCTTTGGATAGTAATGATTCATCTTTAGAACAAGCTCACAAGCTACTAATTGGCGTTTCAGGCTATGTAAGTAAGCCAACCATATATAACTTTGATATGATTATGGAAGTTACTATGAACCTCAGTGAACAACGTAGGATTGGGGGATCAGTGTACAGGGCCAAAATTGATGACCAGATTTTAGCAGTTAAAAAGATCAAGGAGGATGTCACAGAGGAGCTAAAAATTCTACTGAGAGTAAATCATGCAAATCTGGTGAAGTTAATGGGCGTCTCATCAGACAATGAAGGAAATTGCTTCCTGGTTTATGAGTATGCTGAAAATGGGTCTCTTGATAACTTGCTGTACTCCAAGTCTCCAGCCACTTCAAACTCACTGACGTGGAACCAAAGGATATGCATAGCATTAGATGTGGCCTTGGGTTTGCAATACCTGCATGAACACATTCAACCAAGAATAGTCCACAGGGACATCAGCACGAGAAATATCCTTCTTGACTCAAAGTTGAAGGCCaagatttcaaatttctcTATGGCCAGAACTTCCACAAGTACTATGATGCCAAAGATagatgttttttcttttggggttGTTCTGTTGGAGTTGCTAACGGGCCAGAAATCCATGAGAACGAATGAAAGTGGTGAGACTATCCTGCTGTGGAAGGATATCAGGGGAATATTTGATGAACAAGAGAATAAAGAGGACAGGCTCAAAGGATGGATGGATCCTAAGCTGAAGAGTTTTTATCCAATTGATGATGCTCTCAACTTGGCCAATTTGGCAGTGTCTTGCACGGCGGAGAAGAATTCGTCCAGACCAACCATGGCAGAAATTGTTCTTAGTCTCTCCCTTCATACCCAATCAACTCCTGCAAGGATAAAGGGATCCCCTTTTGGGTTAGATGCAGAAGTTCCTCAACCTATTGCGGCTCGTTG 1778 0.4061 MISMAVSILPFPSHALFFALILFSISHISTQSSGTNFSCPADEASVSPCDTYVTYFAKSPNLLSLTNISDLFGISPLSIARASNLTEADSIQLIPGQLLLVPVSCGCTGNRSFANNTYEIKSGDNYFFVSTTLFENLTNWHVVEELNPSLNPNLLQIGVKVVFPLFCRCPSKQQLAKGITNLITYVWQPSDNVALVSAKFNASATDIMAENNYQNFTSAVYQPLFIPVTQLPDLSLPPSNKTKHNNPFGVILGVSLGCTLLIALLATSLVYLYCLRKKKTTLDSNDSSLEQAHKLLIGVSGYVSKPTIYNFDMIMEVTMNLSEQRRIGGSVYRAKIDDQILAVKKIKEDVTEELKILLRVNHANLVKLMGVSSDNEGNCFLVYEYAENGSLDNLLYSKSPATSNSLTWNQRICIALDVALGLQYLHEHIQPRIVHRDISTRNILLDSKLKAKISNFSMARTSTSTMMPKIDVFSFGVVLLELLTGQKSMRTNESGETILLWKDIRGIFDEQENKEDRLKGWMDPKLKSFYPIDDALNLANLAVSCTAEKNSSRPTMAEIVLSLSLHTQSTPARIKGSPFGLDAEVPQPIAAR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01646 592 Gene3D Phosphorylase Kinase; domain 1 298 385 - -
Bva11g01646 592 SUPERFAMILY Protein kinase-like (PK-like) 304 563 IPR011009 -
Bva11g01646 592 Gene3D Transferase(Phosphotransferase) domain 1 466 575 - -
Bva11g01646 592 Gene3D Transferase(Phosphotransferase) domain 1 386 465 - -
Bva11g01646 592 ProSitePatterns Tyrosine protein kinases specific active-site signature. 433 445 IPR008266 GO:0004672|GO:0006468
Bva11g01646 592 Pfam Protein tyrosine and serine/threonine kinase 345 463 IPR001245 GO:0004672|GO:0006468
Bva11g01646 592 ProSiteProfiles Protein kinase domain profile. 289 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01646 592 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 20 576 - -
Bva11g01646 592 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 20 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01646 Bva-Chr11 15061073 15062851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01646 83 570 Receptor kinase-like Gene Family AT3G21630 31.569 4.06e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva11g01646 PK_Tyr_Ser-Thr 6.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01646 - - gmx:100301877 721.465