Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01645 ATGCGTTTCTTTCCTCTCATCCCTGTCTTGGCTTTTGCCATATTCTGTAGCTTCCCTCTGATTCTGGGGCAGCAGCCTTATATTGGATTGGGCACAACTGCATGTCCCAGAAGGGGTAACCCACATTCTATTCGTGGTTACACTTGCAACGGCGTAAATCGTAGTTGCCAAGCTTACCTTACCTTCAGATCTCAACCCATTTACAACTCTGTTAACACAATCTCTGCTTTGTTGGGTGCTGAACCATCTAAGCTTGCGGAGATAAACCAGGTTTCTCGTAATGCAACCTTTGAAACAAATAGGTTGGTGATTGTTCCAGTGAACTGCTCCTGTGCTGGTGAGTATTATCAATCAAACACATCCTACGTAGTACAGAACGCAGACACCTTGTTCTTGATTGCTAACAACACTTTTGAAGGCCTCTCAACCTGTCAAGCTCTAGAGAATCAAAACGAACTGCCCAGAGGAGATTTGTTCTCTGGTACAAGACTTGCAATTCCTCTTAGATGTGCTTGTCCCACAATCAATCAAACTGAGAAAGGTGTCAAGTACCTTTTGAGTTATTTAGTAACCTGGGATGATTCTGTTTCTGTCATCAGTGAAAGATTTGGTGTGTATACTAACAGCACTCTTGATGCTAACACCCTTTCTTATACATCAACCATTTATCCCTTTACCACAATTTTAGTCCCCCTTCAGGGTCCACCCTCCATTTCTGGGACAGCCGAGCCACCTCCATCTCCTTCGCCCCCATCAACTCCCTTTTCACCCTCAGGTGGAAACTCCAACAAAACATGGGTCTATGTTGTTATTGGAGTAGTTGGAGGCATTGCTTTAATATCATCACTCGCTGCCATAATTTTCTGCAGAGTCTACagcaaagataaaaagaaagatgttCCTGTTATTGTCTCTCAGAGTCAGAGTCAGAGTCAGAGTTTTGAGGCAATTGAGAAACCAAAGGGGAAGATCCTATTGGACGGAGAATCTGAAGAATTGTCAGAGATACTATCCAGCATAGGTAAATCGTTGAAAGTGTACAGTTTTAAGGAACTACGAAAAGCCACAGAAGATTTTAGTCCAAGTTTCTGGATCAAAGGATCTGTTTATCGCGGTGTTATTAATGGCGATTTGGCTGCAATTAAAAAGACGGAAGGTGATGTGTCGAAGGAGATAGAACTGCTGAACAAAGTTAACCATTCGAATGTGATACGTCTCTCTGGGGTTAGTTTTAACAAAGGACATTGGTACCTTGTTTATGAATATTCAGCAAATGGATCCTTGAGTGATTGGATCTACTCGAGCAACATTGATGACAAGTTTCTGAACTGGGCGCAGAGAATGCAGATTGCATTGGATGTGGCAACTGGGCTTGACTATCTCCATAGTTTCACTTGTCCTCCTTATATCCACAAGGATTTAAAGAGCAATAACATTCTTCTGGACAGTTATTTCAGGGcaaagatttcaaattttagcCTAGCAAGGTCTGTTGAAGGAGAGGAAGATCAGTTTCCCATGACAAGGCATATTATCGGGACAAAAGGTTACATGGCTCCTGAGTATTTGGAACATGGAGTTGTATCTACAAAACTAGATGTCTACGCATTTGGGATTCTGATGATGGAAATGCTCACTGGAAAAGAAGTTGCTGCTTTTTATACAGAAGAAAAGGTGAATTTGTCAGATTTTTTAAGTGCCATTCTCGACGAGGAAAGTGATCAAGAAAGGTTGGGGGATTTTATGGATCCGTCTCTGCATGGAAATTATCCAACAGAACTTGTCAAGTTTGTGGTAAGACTGATCCTGAATTGCATCGACAAAGATCCAGTAAATCGCCCTGCCCTGCATGAAATTTTGACATTCCTGTCAAGAACCTTGGAATCATCATTGACCTGGGAAACCTCAATGAATATCTCAGCAAACCAGAGTCTATGCAGCAGGAGCTCTTG 1952 0.415 MRFFPLIPVLAFAIFCSFPLILGQQPYIGLGTTACPRRGNPHSIRGYTCNGVNRSCQAYLTFRSQPIYNSVNTISALLGAEPSKLAEINQVSRNATFETNRLVIVPVNCSCAGEYYQSNTSYVVQNADTLFLIANNTFEGLSTCQALENQNELPRGDLFSGTRLAIPLRCACPTINQTEKGVKYLLSYLVTWDDSVSVISERFGVYTNSTLDANTLSYTSTIYPFTTILVPLQGPPSISGTAEPPPSPSPPSTPFSPSGGNSNKTWVYVVIGVVGGIALISSLAAIIFCRVYSKDKKKDVPVIVSQSQSQSQSFEAIEKPKGKILLDGESEELSEILSSIGKSLKVYSFKELRKATEDFSPSFWIKGSVYRGVINGDLAAIKKTEGDVSKEIELLNKVNHSNVIRLSGVSFNKGHWYLVYEYSANGSLSDWIYSSNIDDKFLNWAQRMQIALDVATGLDYLHSFTCPPYIHKDLKSNNILLDSYFRAKISNFSLARSVEGEEDQFPMTRHIIGTKGYMAPEYLEHGVVSTKLDVYAFGILMMEMLTGKEVAAFYTEEKVNLSDFLSAILDEESDQERLGDFMDPSLHGNYPTELVKFVVRLILNCIDKDPVNRPALHEILTFLSRTLESSLTWETSMNISANQSLCSRSS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01645 650 Pfam LysM domain 122 167 IPR018392 -
Bva11g01645 650 Pfam LysM domain 190 231 IPR018392 -
Bva11g01645 650 Gene3D LysM domain 186 237 IPR036779 -
Bva11g01645 650 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 638 - -
Bva11g01645 650 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Bva11g01645 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Bva11g01645 650 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 1 638 - -
Bva11g01645 650 Gene3D Phosphorylase Kinase; domain 1 330 422 - -
Bva11g01645 650 Gene3D Transferase(Phosphotransferase) domain 1 424 638 - -
Bva11g01645 650 SMART LysM_2 121 167 IPR018392 -
Bva11g01645 650 SMART LysM_2 187 231 IPR018392 -
Bva11g01645 650 ProSiteProfiles Protein kinase domain profile. 277 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01645 650 MobiDBLite consensus disorder prediction 238 255 - -
Bva11g01645 650 ProSiteProfiles LysM domain profile. 186 230 IPR018392 -
Bva11g01645 650 MobiDBLite consensus disorder prediction 236 258 - -
Bva11g01645 650 ProSiteProfiles LysM domain profile. 120 166 IPR018392 -
Bva11g01645 650 Pfam Protein kinase domain 382 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01645 650 SMART serkin_6 338 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01645 650 SUPERFAMILY Protein kinase-like (PK-like) 342 623 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01645 Bva-Chr11 15057718 15059670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01645 9 636 Receptor kinase-like Gene Family AT2G23770 44.757 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva11g01645 Pkinase 2.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01645 - - gmx:100815842 816.994