Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01634 ATGAACCACTCTCgtattgatgatgatgatatggCACTTATCTCTCGACTATATCCAGGTTCATACACTCAAATGAACTCACAAGGGGAGACGAAGCCAAAACGTCGTCGTAATAAGAAGAAAGGAGTAGCAAATGGATCAGTGGGAGCCAGGAAGAGGAAGCTGAGTGCAGAGCAAGCTAAACTTCTTGAACTACACTTTGGGAATGAGCATAAATTAGAGTCTGAAAGAAAGGACCGGCTGGCGTCTGAACTGGGCTTGGATCCTCGGCAAGTGGCCGTTTGGTTCCAGAACCGGAGGGCACGGTGGAAGAACAAGAAGTTGGAGGAAGAGTACTCCAACCTTAAAAAACTCCACGAAACCACCATCATTGAGAACTGCCACCTTCAAAACGAGGTGTTGAAGTTAAAGGAGAAGCTCTTAGAGgctgagaaagaaaatcaacGGCTACTAGAGAGTGGGAGCAGCAGTCCAACATCTTCACAAACACAGTCAATAGGAGCTATGGACCCCCCATTTCTAGGAGAGTTTGGAGAAGCATATGACTATGACTATGATATGTTTTCCATGCCAGAGACCCATTACATTAACGGCATGGAATGGATAAATCTTTACGTTTG 620 0.429 MNHSRIDDDDMALISRLYPGSYTQMNSQGETKPKRRRNKKKGVANGSVGARKRKLSAEQAKLLELHFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSNLKKLHETTIIENCHLQNEVLKLKEKLLEAEKENQRLLESGSSSPTSSQTQSIGAMDPPFLGEFGEAYDYDYDMFSMPETHYINGMEWINLYV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01634 206 MobiDBLite consensus disorder prediction 20 51 - -
Bva11g01634 206 Pfam Homeodomain 52 105 IPR001356 GO:0003677
Bva11g01634 206 CDD homeodomain 51 107 IPR001356 GO:0003677
Bva11g01634 206 SUPERFAMILY Homeodomain-like 52 114 IPR009057 -
Bva11g01634 206 SMART HOX_1 49 110 IPR001356 GO:0003677
Bva11g01634 206 Coils Coil 98 125 - -
Bva11g01634 206 ProSitePatterns 'Homeobox' domain signature. 81 104 IPR017970 GO:0000981|GO:0006355
Bva11g01634 206 MobiDBLite consensus disorder prediction 150 168 - -
Bva11g01634 206 PRINTS Lambda-repressor HTH signature 77 86 IPR000047 GO:0003677
Bva11g01634 206 PRINTS Lambda-repressor HTH signature 86 102 IPR000047 GO:0003677
Bva11g01634 206 Gene3D - 42 114 - -
Bva11g01634 206 MobiDBLite consensus disorder prediction 147 171 - -
Bva11g01634 206 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 7 205 IPR045224 GO:0003700
Bva11g01634 206 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE 7 205 - -
Bva11g01634 206 ProSiteProfiles 'Homeobox' domain profile. 46 106 IPR001356 GO:0003677
Bva11g01634 206 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01634 Bva-Chr11 15001100 15003169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01634 1 206 Homeobox Transcription Factor Family AT4G36740 53.211 2.38e-72 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bva11g01634 Homeodomain 3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01634 K09338 - mnt:21392390 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00705 08 3644892 3646948 Bva11g01634 11 15001100 15003169 BWGD