Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01630 ATGAGAGTTCCCGTTCCATCTCCACAAAACAATAACCGTTCCAGCAATCCAAAACCCAACAACACAACCCGTCCTCCTTCCAACGTGAATCCAAGCCTGTGCTACGAACCCACTTCTGTTCTCGATCTGTGCCGCAGTCCAAGCCCAGGGTCAGTTCCGGAGAAGCCTACCGACAACTCAGCTGTGACGGACTCGCTGTCAAAGCCAGAAGAGTCTGTGGAGCTGGACGAACATGTGTTGCATAATCTTGATTGGGATTCCATCATGAAGGACTTGGGTTTGAACGACGACTCGGGCCCAGCCGTTTTGAGGAGTATTTCTCATCCCAATCCATGTGAACCTCAAGTTCCACACTTGCCTGAGCTCGTAGGTTCTCAAGAACCGACGTTTGATCACTCTGCAGAATATTTCAGTCTCTCAGAGGCTTACTCCAATCAAAATCCGGGTTTTTATAGCAGCGGAACTTTTGATCATTTGGTTCAGGAGTTCAATCACAACAGCAATTGGAACCACAGCGCTGATTTCATCGAAGAGCTCATTCGGGCCGCTGATTGTTTTGACACCAACCAACTACATATCGCTCAGGTGATATTGGAGCGGCTCAATCAACGACTACGCTCACCGGTCGGAAAACCCCTTCAGAGAGCGgctttttatttcaaagatGCCCTCCAATCGCTTCTTTCCGGTTCGAACCGGACCCCGCGCTTTTCTTCCTTGGTGGAAATTGTGCATACCATCAGAACCTTCAAGGCCTTCTCTGGCATCTCGCCAATTCCCATGTTCTCTATCTTCACCACCAATCAAGCACTCCTCGAAGCCCTTCACGGTCCATCTTTTATGCACGTTATAGATTTTGACATCGGTCTCGGGATCCAATACGCCTCTCTCATGAAAGAGATTGCTGAGAAGGCTGAGTCATATAAACTCAACTCGCCGTTGCTTCGAATCAGCGCCGTCGTTGCCGAAGAATACGCAGTGGAGAGCAAATTGATCAGAGAAAACCTGAACCAGTTCGCTAACGAACTCAGAATCAGGGTACAGGTGGACTTCGTCCTGATGCGGACCTTCGAGACGTTGTCGTTTAAGGCCATCAAGTTCATTGATGGAGAGAAGACCGCCGTTCTCTTATCTCCCACGATCTTTCGCCGCCTTGGTTCGACCGGCAACGTGACCGCATTTCTCGGGGATGTTCGGAGGGTTTCGCCCAGTGTGGTTGTTTTTGTTGACAACGAAGGGTGGACGGAAGGGGCAGCAGCGACTTCGTTTCGTCGGAGTGTGGTTAACAGCCTGGAGTTCTACTCGATGATGTTGGAGTCTTTGGATGCGTCTACAGTGGGTGGTGCGGCGGATTGGATACGGAAAATTGAGACGCTTCTACTGCGACCCAAGATTATGGCGGCGGTGGAAGGCGCAGGACGGCGATTATCGCCGTGGATGGAAGCGTTTTATGGCGCGGGAATGAGGCCCCTCCTGTTAAGCCAGTTCGCGGATTTTCAAGCCGAGTGTTTATTGGCCAAGGTGCAAATTAGAGGTTTCCAGGTGGCAAAACGACAAGCTGAGCTGGTGCTCTTCTGGCATGAGCGGGCCCTGGTTGCTACGTCAGCTTGGCGTTGTTA 1619 0.5065 MRVPVPSPQNNNRSSNPKPNNTTRPPSNVNPSLCYEPTSVLDLCRSPSPGSVPEKPTDNSAVTDSLSKPEESVELDEHVLHNLDWDSIMKDLGLNDDSGPAVLRSISHPNPCEPQVPHLPELVGSQEPTFDHSAEYFSLSEAYSNQNPGFYSSGTFDHLVQEFNHNSNWNHSADFIEELIRAADCFDTNQLHIAQVILERLNQRLRSPVGKPLQRAAFYFKDALQSLLSGSNRTPRFSSLVEIVHTIRTFKAFSGISPIPMFSIFTTNQALLEALHGPSFMHVIDFDIGLGIQYASLMKEIAEKAESYKLNSPLLRISAVVAEEYAVESKLIRENLNQFANELRIRVQVDFVLMRTFETLSFKAIKFIDGEKTAVLLSPTIFRRLGSTGNVTAFLGDVRRVSPSVVVFVDNEGWTEGAAATSFRRSVVNSLEFYSMMLESLDASTVGGAADWIRKIETLLLRPKIMAAVEGAGRRLSPWMEAFYGAGMRPLLLSQFADFQAECLLAKVQIRGFQVAKRQAELVLFWHERALVATSAWRC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01630 539 MobiDBLite consensus disorder prediction 1 35 - -
Bva11g01630 539 MobiDBLite consensus disorder prediction 52 67 - -
Bva11g01630 539 MobiDBLite consensus disorder prediction 1 73 - -
Bva11g01630 539 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 538 IPR005202 -
Bva11g01630 539 PANTHER SCARECROW-LIKE PROTEIN 15 5 538 - -
Bva11g01630 539 Pfam GRAS domain family 176 538 IPR005202 -
Bva11g01630 539 ProSiteProfiles GRAS family profile. 166 538 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01630 Bva-Chr11 14981231 14983215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01630 73 538 GRAS Transcription Factor Family AT4G36710 55.394 2.63e-168 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva11g01630 GRAS 5.5e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01630 - - cam:101510420 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00709 08 3663521 3665769 Bva11g01630 11 14981231 14983215 BWGD