Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01627 ATGCCGATTGATTTAGATAACTCTTCCACAGCTTCAGGGGAAGCTAGCGCCTCTTCCTCTGGCAATCAGACAGTACCTCAGAAGTCCACGgttaagaaaaagagaaacctTCCAGGAATGCCAGATCCAGACGCAGAAGTGATTGCTCTATCTCCGAAGACCCTTTTGGCCACAAACCGATTCGTATGTGAAATTTGCAACAAAGGATTTCAGAGGGATCAGAATCTTCAGCTTCATCGACGAGGTCACAATCTGCCATGGAAGCTTAGGCAGAGGTCAAGCAAGGAGGTGAGAAAGAGAGTTTATGTGTGTCCAGAGCCAACCTGTGTCCATCATGATCCCTCCAGAGCTTTGGGTGATCTTACTGGGATAAAGAAGCATTTTTGTAGAAAACACGGCGAGAAGAAGTGGAAATGCGACAAGTGTTCAAAGAAATATGCAGTGCAGTCAGATTGGAAGGCTCACTCTAAAATTTGTGGTACCAGAGAGTACAAATGCGATTGTGGGACTTTGTTTTCAAGGAGGGATAGCTTTATCACGCACAGGGCGTTTTGCGATGCCTTGGCAGAGGAGAGTGTAAGGGGTCAGACTCAGACGCCGGGCCAGACCCAGATTCAGGCTGCTGCAAAACCTAATTCTGAGGCAGACACCAAAGTTGTACCTGATGAttcgccgccgccgccgcctcCACCCCAATCTCCAGCTCCATCAGCTCCTTCCCAGTCAAATAGTATCATGTCCTCTGCTGTGCAGACGCAAAAACCAGAAAATCCTCCCCAAATCGCAGAGGAACAACCTCAGGCAACTACTGCTCTAAATGGGAGCTGTAGCAGCAGCACCAGTTCAACAAACAATAGTGGTACCAGCAGTACTATATTTGCTAGTTTGTTTGCTTCTCCAACGGCATCTGGAAACCTACAATCTCCTCAAGCACCAGCATTTACTGAGCTAATTAGAGCCATGTCCCGCCAAGATCGTCCAGCAGACCTCGCGGGTCCTTCATCTTCTGAGCCCATTTCTCTCTGCCTCTCCACCAATCAGGGGTCATCAATCTTTGGAACAGGAGGCCAAGAGCGTCGGCAATATGCCCCACCACCACAGCCAGCAATGTCTGCCACTGCTCTGCTACAGAAAGCTGCTCAAATGGGTGCAGCTTCTACAAATGGCTCATTGCTTCGTGCACTTGGTATAGTGTCATCTTCAACTACATCTTCATCAGGCCAGCAAGACAATTTGCAATGGGGTCAGCGACAATTAGAGCCAGAGAGTGCCTCAGTTCCTGCAGGGCTTGGACTTGGGCTTCCTTGTGATGGTAGCTCTGGATTGAAGGAATTAATGATGGGAACTCCTTCCATGTTTGGTCCAAAGCAAACCACCCTTGATTTTCTTGGATTGGGGATGGCTGCCGATGGCACCCCCAGTGGAGGCTTATCAGCACTCATCACATCAATAGGTGGTGGTGGTCTGGATGTTACTGCTGCCGCAGCATCTTTTGGCAATGGAGAGTTCTCTGGCAAAGATATAGGAAGGAGCTCATG 1538 0.4766 MPIDLDNSSTASGEASASSSGNQTVPQKSTVKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESVRGQTQTPGQTQIQAAAKPNSEADTKVVPDDSPPPPPPPQSPAPSAPSQSNSIMSSAVQTQKPENPPQIAEEQPQATTALNGSCSSSTSSTNNSGTSSTIFASLFASPTASGNLQSPQAPAFTELIRAMSRQDRPADLAGPSSSEPISLCLSTNQGSSIFGTGGQERRQYAPPPQPAMSATALLQKAAQMGAASTNGSLLRALGIVSSSTTSSSGQQDNLQWGQRQLEPESASVPAGLGLGLPCDGSSGLKELMMGTPSMFGPKQTTLDFLGLGMAADGTPSGGLSALITSIGGGGLDVTAAAASFGNGEFSGKDIGRSS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01627 512 MobiDBLite consensus disorder prediction 221 237 - -
Bva11g01627 512 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Bva11g01627 512 MobiDBLite consensus disorder prediction 1 43 - -
Bva11g01627 512 MobiDBLite consensus disorder prediction 192 288 - -
Bva11g01627 512 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Bva11g01627 512 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Bva11g01627 512 MobiDBLite consensus disorder prediction 238 288 - -
Bva11g01627 512 Gene3D Classic Zinc Finger 115 194 - -
Bva11g01627 512 MobiDBLite consensus disorder prediction 192 211 - -
Bva11g01627 512 MobiDBLite consensus disorder prediction 1 31 - -
Bva11g01627 512 SMART c2h2final6 61 83 IPR013087 -
Bva11g01627 512 SMART c2h2final6 102 132 IPR013087 -
Bva11g01627 512 SMART c2h2final6 137 157 IPR013087 -
Bva11g01627 512 MobiDBLite consensus disorder prediction 402 420 - -
Bva11g01627 512 Gene3D Classic Zinc Finger 41 107 - -
Bva11g01627 512 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 511 - -
Bva11g01627 512 MobiDBLite consensus disorder prediction 402 422 - -
Bva11g01627 512 PANTHER ZINC FINGER PROTEIN GAI-ASSOCIATED FACTOR 1 1 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01627 Bva-Chr11 14963682 14967016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01627 1 512 IDZ Gene Family AT5G66730 59.963 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva11g01627 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01627 K25869 - gmx:100806404 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00712 08 3679426 3682678 Bva11g01627 11 14963682 14967016 BWGD