Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01623 ATGCCGTTCCAAAGATCCCTCCACCATGCCATCAAACCCAGTCCCTTCATTCTCCAAACTCATCAACTTTCAATTTTCCCCGCGGTCCCACCACCCTCCAAACCCCACCACTCCTCCCTCGGACGCCAAGTGTCCTCGGCGCTTACCTCCGTCGGATGCGGTTTCAGATCAAGAGCGACCCTCTCCGACGACGACTTCCAGTGGGAACAAGAAGATAAATGGCACGTTGTCGCCAAAGTCTACGAAGAAACTCCTCGTCGCAAAATCTACAACTCCTCAGTCTCCGGCGGATCAGACACCGACGACGATGGCGTTTTGCCTCTTCCACCACCCTCGCGCATCTCTAAGAAGAAACGGCTtgctaaaaagaagaaaactacacGAAGAACAGCTCGGATCAGCACCTCCTCAGCGGACAGCTGTGGAATATTCAGTAGTGACGGTTACGACGAGAGAGACCTGGACGAAGAAGAAACCGAAACCCTAGTTTCGTCTTCTAGAAGCTTCTCCACAGAGTCGTCCTTCGAGTTCAACCCTCACTTGGAGACCATCTGCGAGACCCCAAGCAACGGAGGAGAAAAgatgaagcagaagcagaagaggatgaagaagaacaggaaaaagaaaacaagacgGAGTGTTTCTAATAGGAAGAAGTCAACTTCATCACCGGAGAACGGGTCGCCGGCGAGGCTGTCAATGTTTCAGAGGCTGATACCGTGCAGGGTGGAAGGGAAGGTGAGAGAGAGCTTCGCGGTGGTGAAGAAGTCGGAGGATCCGTACGGGGATTTTAAGAGGTCGATGGTTGAGATGATTTTAGAGAAGCAAATGTTTGAGGAGAAGGATCTGGAGCAGCTCTTGCACTGTTTCTTGTCTCTCAATTCTAAGAAACATCATGGGATTATTGTTGAGGCTTTCACTGAGATTTGGGAGGCTTTGTTTTGTGCAAGACCAGCTAAATTATcata 968 0.469 MPFQRSLHHAIKPSPFILQTHQLSIFPAVPPPSKPHHSSLGRQVSSALTSVGCGFRSRATLSDDDFQWEQEDKWHVVAKVYEETPRRKIYNSSVSGGSDTDDDGVLPLPPPSRISKKKRLAKKKKTTRRTARISTSSADSCGIFSSDGYDERDLDEEETETLVSSSRSFSTESSFEFNPHLETICETPSNGGEKMKQKQKRMKKNRKKKTRRSVSNRKKSTSSPENGSPARLSMFQRLIPCRVEGKVRESFAVVKKSEDPYGDFKRSMVEMILEKQMFEEKDLEQLLHCFLSLNSKKHHGIIVEAFTEIWEALFCARPAKLS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01623 322 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 251 313 IPR006458 -
Bva11g01623 322 MobiDBLite consensus disorder prediction 90 230 - -
Bva11g01623 322 Pfam Transcriptional repressor, ovate 257 314 IPR006458 -
Bva11g01623 322 ProSiteProfiles OVATE domain profile. 253 312 IPR006458 -
Bva11g01623 322 MobiDBLite consensus disorder prediction 163 185 - -
Bva11g01623 322 MobiDBLite consensus disorder prediction 197 216 - -
Bva11g01623 322 MobiDBLite consensus disorder prediction 115 130 - -
Bva11g01623 322 PANTHER - 52 316 - -
Bva11g01623 322 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 316 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01623 Bva-Chr11 14941384 14942352 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Bva11g01623 Ovate 2.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01623 - - qsu:112005201 325.865