Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01599 ATGGCATCATCTTGGACTCCGAAGCAAAACAAACTATTTGAAAAGGCCCTGGCTTTATATGATAAGGAAACCCCTGATAGGTGGCAGAATGTTGCCAAAGTGGTGGGGAAATCTGTAGAGGAAGTTAAAAGGCACTATGAAATCCTCAAGGAAGATGTGGAACGCATTGAGCATGGTCAAGTCCCATTCCCCCGTTACAGAAACAGCAACAACACCTA 218 0.445 MASSWTPKQNKLFEKALALYDKETPDRWQNVAKVVGKSVEEVKRHYEILKEDVERIEHGQVPFPRYRNSNNT 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01599 72 Coils Coil 39 59 - -
Bva11g01599 72 SMART sant 1 52 IPR001005 -
Bva11g01599 72 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Bva11g01599 72 CDD SANT 4 50 IPR001005 -
Bva11g01599 72 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Bva11g01599 72 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 71 - -
Bva11g01599 72 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 71 IPR044636 GO:0003700
Bva11g01599 72 Gene3D - 2 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01599 Bva-Chr11 14829164 14829382 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva11g01599 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01599 - - lja:Lj4g3v0973380.1 134.42