Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01598 ATGGGAACTGATGTCAGTGAAGTGGTGGAGTCGTTACCAAATCCTCGCTCCTTTAAGGTACATCTTACAATGTGTACAGAACTTATGAAATTAGTTGATAGAATCTCAAGAATACTTCCAGATATAGAGGCAGCTCGGCCTCGATGCTCTTCAGGAATACAGGCCCTGTGCTTGCTAAACAGTGCAATTGATAAAGCCAAACTTCTTCTGCAGTATTGCTGTGAATCTACTAAACTCTACCTGGCTGTGACAGGGGATGCAATTCTCTCAAGATGCCAGAAAGCGAGAAAAGCATTGGAACAAAGCTTATGCGCAATTCAAAATATGGTTCCAGTTATGTTGGCTGCTGAGatTTCTCAAATAATTGATGATATTGGGTCTGTGACATTTATCCTGAACCCAGCTGAAGAAGAGGCTGGGAGGGTTGTGAGAGAATTACTTCAGCAAGGCAGTTCAGCATCAGATTCAATGGAAAATTCTGAGATTAATGCTCTTAAATTTGCAGCTGCAAGACTTGATATAACTACCCAAAAGGCCATCTTAATAGAGAAAAGATCCATTAAGAAGTTGCTGGATAAAGTTGGATCAAATGATTCAAGCAAAAAGATGATCTTGAGATATCTTTTGTATCTACTGAAAAGGTATGGAAACTTGATTATTGGAGAACAGTTGGAGAAGGTCTACACTCGTAGTGAAGGACCAATTGCAAGTGAGAACTCTACACGCAGTTCCTTGCGTGGCCATAATATTGAATCAGGTCCATGCTCTCACTCCCAGTATGAAACTCACAATAGTGAATCAAGTAGGCCCCCTGAGGAATATATGTGCCCCATATCTTCAAAAGTGATGTATGATCCCGTTGTCATTGCTTCTGGAGTAACATATGAAAGGATGTGGATAAAGAAGTGGTTTGATGAGGGCAATGATTTATGCCCCAAAACTGGGAAAAAGCTGGCCCATATGTCATTGACTGCAAACATTGCCATGAAGGACTTAATATCAAAGTGGTGCAGAAATAATGGAGTCACCATTCCAGATCCAAGTAGGAAATCTGAAGATTTTCGCTCTTGGGACGTTTCCTCCACTTCCATTAGGAGCTTCGGCAGTTCTATGAATGATTTGCACTTGCCAGATCTTAGTAACATGTCACTTGGATCATTAGAGACTAGTTATAGTTCAGATTCTTCTCATGCTAAGACCACTCATGGCTTGATGAATACCAATTACAATTCTCAGAGACAGCAAACTGAAACGCACATGCATGATTCCGATTTGATGCTTTTGTCTAAACTCCCTGGCCTTCAATGGGATTTGAAATGCCAGGTCATTGAAGATCTGAAAGGCTGTTTCAAGTGCAATTACGAAGCTTTTAATTCTGTTTTACCTGAGGATTTCATGGAACCTCTCATTGGATTTCTGAGAGACGCATATAATCTGCATGATGTGAGTGCATTGAGAACTGGAACTCAGGTGCTTTTGGAATTTGTAAGCAATTGCAGAAATGGTTTAACCTTTTTAAGTGAAGATACATTCAGTACGTTGGCAAGTTTTCTTGATTCAGAAGTAATGGGAGAAGCACTTGCCATAATAGAGGAATTGTCTGGGTATGCTAAAATTGCAGTATCCAATGCATTCACTTCCGTTTTAAAAATCCTTGACTCAGAGAGCCAAGAGTACCAACAACAAGCCGTGAGAATAATCTATCACTTGTCTTTCAATGGTGAAATTTGTTCTCGCTTGGTATCTCTCGAGTGCATCCCGAAATTGCTACCATTTTTAGTAGACAGGGCCCTGGCGAGATACTGTGTATGTATATTGAAAAACCTCTGTGACACCGAAGAGGGTCGGATTTCTCTTGTAGAAACTAAAGGATGCATATCTTCTGTTGCTGAAATACTTGAGAATGGTAGTAACGAGGAACAAGAACATGTATTGGCTGTCCTGCTCTCTTTATGCTCTCAACGTGTCGAGTATTGTCAGTTGGTCATGGATGAAGGGGTTATTCCTTCTCTTGTCTATATCTCCAACAATGGAAATGACAGAGGAAAGGTGAATGCATTGGAATTGCTTCGTCTTTTGAGGGATGTTGAATATGTTGAGAGTGAAGAAAGCATTGCACCAAATCTGGAGACTACGCAAGATTCTAACGCTCAGCCTCAAcctcaagaaaagaaatcatctAAGGGATCTGGTTTTTTGAAGAAACTATCGGTGTTCTCGAAATCCAGTTCACATTCATCAAGAAACAAGAGATG 2255 0.4018 MGTDVSEVVESLPNPRSFKVHLTMCTELMKLVDRISRILPDIEAARPRCSSGIQALCLLNSAIDKAKLLLQYCCESTKLYLAVTGDAILSRCQKARKALEQSLCAIQNMVPVMLAAEISQIIDDIGSVTFILNPAEEEAGRVVRELLQQGSSASDSMENSEINALKFAAARLDITTQKAILIEKRSIKKLLDKVGSNDSSKKMILRYLLYLLKRYGNLIIGEQLEKVYTRSEGPIASENSTRSSLRGHNIESGPCSHSQYETHNSESSRPPEEYMCPISSKVMYDPVVIASGVTYERMWIKKWFDEGNDLCPKTGKKLAHMSLTANIAMKDLISKWCRNNGVTIPDPSRKSEDFRSWDVSSTSIRSFGSSMNDLHLPDLSNMSLGSLETSYSSDSSHAKTTHGLMNTNYNSQRQQTETHMHDSDLMLLSKLPGLQWDLKCQVIEDLKGCFKCNYEAFNSVLPEDFMEPLIGFLRDAYNLHDVSALRTGTQVLLEFVSNCRNGLTFLSEDTFSTLASFLDSEVMGEALAIIEELSGYAKIAVSNAFTSVLKILDSESQEYQQQAVRIIYHLSFNGEICSRLVSLECIPKLLPFLVDRALARYCVCILKNLCDTEEGRISLVETKGCISSVAEILENGSNEEQEHVLAVLLSLCSQRVEYCQLVMDEGVIPSLVYISNNGNDRGKVNALELLRLLRDVEYVESEESIAPNLETTQDSNAQPQPQEKKSSKGSGFLKKLSVFSKSSSHSSRNKR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01598 751 SUPERFAMILY RING/U-box 259 347 - -
Bva11g01598 751 MobiDBLite consensus disorder prediction 705 727 - -
Bva11g01598 751 Gene3D - 441 712 IPR011989 -
Bva11g01598 751 CDD RING-Ubox_PUB 276 316 IPR045210 -
Bva11g01598 751 SMART Ubox_2 273 336 IPR003613 GO:0004842|GO:0016567
Bva11g01598 751 MobiDBLite consensus disorder prediction 233 265 - -
Bva11g01598 751 ProSiteProfiles U-box domain profile. 269 343 IPR003613 GO:0004842|GO:0016567
Bva11g01598 751 Pfam U-box domain 271 340 IPR003613 GO:0004842|GO:0016567
Bva11g01598 751 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 344 IPR013083 -
Bva11g01598 751 SUPERFAMILY ARM repeat 450 693 IPR016024 -
Bva11g01598 751 MobiDBLite consensus disorder prediction 233 272 - -
Bva11g01598 751 PANTHER U BOX DOMAIN-CONTAINING 2 725 - -
Bva11g01598 751 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 725 - -
Bva11g01598 751 MobiDBLite consensus disorder prediction 704 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01598 Bva-Chr11 14812519 14817364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01598 15 733 U-box Gene Family AT4G36550 38.400 6.56e-142 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01598 - - gmx:100791627 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00747 08 3882719 3887942 Bva11g01598 11 14812519 14817364 BWGD