Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01592 ATGAATGATCTGATGACGAATTCGTTCTTAAGTTATGTTGAACTGAAGAAACAAGTGCAAAAGGACCTTGAAGCTGATCTTGACATTGAAGCAGGGCAACTCAAGCCCCTAGAAGACCAGAACCTCTCTCTGTTCTTTCAAGAAGTTGACACAATCAAGGCTGAAATGAAAGATATTAGCAATCTCTTGTTTGATCTTCAACACCTGAATGAAGAGACAAAATCAATCCACAGTGCCAAAGTTCTTCGCGGGCTAAGAGACCGAATGGAATCTGACATGGCTGCCGTTCTTCGCAAAGCAAAGATTATTAAGGCAAGGCTACAAGGGCTAGATCAATCCAACATAAACAATCGCAAAATATCAGAAGCCTACAAAGAAGGAACTCCAATTGATAGAACAAGGATTTCAGTCACAAATGGTTTGAGGGTCAAGCTTAGGGACATGATGAATGATTTTCAGTCCTTGAGAGACAAGATTCTATTTGATCACAAGGAAGATCTCAAGAGAAGGTACTACTCTGCAACAGGGGAGATCCCAAGCGAGGAGATGATGGACAAGATGATTTCAGGGAGTCTTAAAGTTGAGTCATTTGCTGGGAAAACAGAGGCTGATATGGATACCCAGCTCAGGCACGAAGCTGTGAGAGACATACAGAGAAGTTTGAACAAGCTTCGCCAGGTTTTCCTTGATATGGCTGTTCTGGTTGAGACACAAGGCGAAAAGATAGACGACATTGAAGAGAATGTAGCCAATGCTTGTAACTTCATTCATGGTGGAACTAATAGTCTCTACTATGCCGAGCAGATGAAGAAAAGGAACAGAAAATGGGTCTTCTGTGTTGGTGCTTTGCTGCTGATTGTACTATTGGTGTGCTTCGTTTCAACATTCACTTCTTG 896 0.4196 MNDLMTNSFLSYVELKKQVQKDLEADLDIEAGQLKPLEDQNLSLFFQEVDTIKAEMKDISNLLFDLQHLNEETKSIHSAKVLRGLRDRMESDMAAVLRKAKIIKARLQGLDQSNINNRKISEAYKEGTPIDRTRISVTNGLRVKLRDMMNDFQSLRDKILFDHKEDLKRRYYSATGEIPSEEMMDKMISGSLKVESFAGKTEADMDTQLRHEAVRDIQRSLNKLRQVFLDMAVLVETQGEKIDDIEENVANACNFIHGGTNSLYYAEQMKKRNRKWVFCVGALLLIVLLVCFVSTFTS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01592 298 PANTHER SYNTAXIN-112 3 294 - -
Bva11g01592 298 CDD SNARE_syntaxin1-like 206 263 - -
Bva11g01592 298 Gene3D - 199 296 - -
Bva11g01592 298 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 204 266 IPR000727 -
Bva11g01592 298 SMART tSNARE_6 199 266 IPR000727 -
Bva11g01592 298 Pfam SNARE domain 240 290 IPR000727 -
Bva11g01592 298 SMART SynN_4 37 164 IPR006011 GO:0016020
Bva11g01592 298 CDD SynN 45 192 IPR006011 GO:0016020
Bva11g01592 298 Pfam Syntaxin 45 239 IPR006011 GO:0016020
Bva11g01592 298 Gene3D - 38 170 - -
Bva11g01592 298 PANTHER SYNTAXIN 3 294 IPR045242 -
Bva11g01592 298 SUPERFAMILY t-snare proteins 40 259 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01592 Bva-Chr11 14793118 14794314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01592 1 298 SNARE and Associated Proteins AT2G18260 57.329 1.67e-124 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01592 K08486 - jre:108997509 454.521