Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01579 ATGATGTTTTCTAGCAAAGACATGCCTTCCCCATCTTCAATGTTCTCAGCCTATGCCTCCATGACTGCCTCAATTATGCTCATGCGTTCAATGGTGAACGATCTGATACCCCAGCCAATTCGTGGCTACCTTGTGAATACATTCCGGTACTTCATCAAACCTCGTTCTCCCATTCTCACCCTTATCATCGAAGAATCCAGCGGCATAGCTCGCAACCAAGTCTATGATGCCGCGGAGGTTTACTTGTCCACCAGAGTCAGTCCCCTCAATGAAAGGCTGAAAATCTTCAAGAGTCCCAAGGAGAAGAAATTGACCATTCGGCTTGAGAAGGGTGAAAAGATTGTTGATTTCTATGATGGGGTTGAGCTCAAGTGGAGATTTATTTGTGCAGAGTCCGAGAAGAATAACCCCAATGAGAACAACATAGCTATCAGATCAGAAAAGCGATATTTCGAGCTCTGTTTCCACAAGAAGCACAAGGAAATAGTGTTGGACAATTATCTGCCTTTCATTCTTGAAAAAGCCAAGGAGGTGAAGGACGGGGAAAGGACATTAAAGATGCACACTTTGAACACTTCCTACTGTTATAATGGCGTCAAATGGGATTCCATCAATCTGGAACACCCATCCACCTTTGAGACTCTGGCTATGGAGCCAGAGCTGAAGAAAGCTGTGGTTGAAGATTTGAATAGGTTCGTCAAGAGGAAAGATTTCTACAAGAAAGTGGGCAGAGCATGGAAACGTGGGTACTTGCTCTATGGGCCTCCGGGCACCGGAAAATCGAGCTTAATTGCAGCCATGGCTAATTACTTGAAGTTTGACATCTATGACCTGCAACTTGGTAACATAGTGAGAGATTCCGACCTCAGAAAGTTGCTGCTGGCTACGGCAAATAGATCTATTCTGGTAATTGAGGACATTGATTGCAGTGTGGATTTGCCGGAGCGTTCTCGGAATTCGGATGGACGAAAGCAAGCTGACGTACAGTTGACATTGTCTGGGTTACTGAACTTCATAGATGGGCTATGGTCAAGTTGTGGTGACGAGAGAATAATCATATTCACCACAAACCACAAGGAAAGGCTTGACCCAGCTTTGCTGCGACCGGGGAGAATGGACATGCACATTCACATGTCCTATTGCTCCTATGATGGCTTCAAGCTTTTGGCCTCTAATTACCTGGGAATTTCCTCGGAAGAACATCATCTGTTTGGAGAGATCGAAGGTTTGATAGAGGACACACAGGTAACCCCTGCACAAGTTGCAGAGGAAATGATGAAGAGTGAAAACCCTGATGCTGCACTTGAAGGATTCGTCAACCTGctaaagaggaagaaattagAAGGTGATGTGAGTGAGAATGATGCTCCAATCAAACCAGATTTTCAACAACCAAAAAGGAGGAAAGTTTGTAGAAGGCAGAAAAAGACTGTAGGGATCAGCACCAGATTAAGTACAAGTTCAAAGAGAAGGACAAGAAGGGGAAACAGCTtgta 1496 0.4418 MMFSSKDMPSPSSMFSAYASMTASIMLMRSMVNDLIPQPIRGYLVNTFRYFIKPRSPILTLIIEESSGIARNQVYDAAEVYLSTRVSPLNERLKIFKSPKEKKLTIRLEKGEKIVDFYDGVELKWRFICAESEKNNPNENNIAIRSEKRYFELCFHKKHKEIVLDNYLPFILEKAKEVKDGERTLKMHTLNTSYCYNGVKWDSINLEHPSTFETLAMEPELKKAVVEDLNRFVKRKDFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLGNIVRDSDLRKLLLATANRSILVIEDIDCSVDLPERSRNSDGRKQADVQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYDGFKLLASNYLGISSEEHHLFGEIEGLIEDTQVTPAQVAEEMMKSENPDAALEGFVNLLKRKKLEGDVSENDAPIKPDFQQPKRRKVCRRQKKTVGISTRLSTSSKRRTRRGNSL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01579 498 Pfam Domain associated at C-terminal with AAA 36 128 IPR025753 -
Bva11g01579 498 MobiDBLite consensus disorder prediction 452 467 - -
Bva11g01579 498 SMART AAA_5 246 382 IPR003593 -
Bva11g01579 498 ProSitePatterns AAA-protein family signature. 350 368 IPR003960 GO:0005524|GO:0016887
Bva11g01579 498 PANTHER BCS1 AAA-TYPE ATPASE 7 467 - -
Bva11g01579 498 CDD AAA 247 380 - -
Bva11g01579 498 Pfam ATPase family associated with various cellular activities (AAA) 251 379 IPR003959 GO:0005524|GO:0016887
Bva11g01579 498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 426 IPR027417 -
Bva11g01579 498 PANTHER BNAA10G17020D PROTEIN 7 467 - -
Bva11g01579 498 Gene3D - 377 450 - -
Bva11g01579 498 MobiDBLite consensus disorder prediction 452 498 - -
Bva11g01579 498 Gene3D - 199 376 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01579 Bva-Chr11 14737223 14740064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01579 206 378 Calmodulin-binding Proteins AT3G56690 30.220 6.36e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01579 - - gmx:100789621 801.201