Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01575 atGTCAGCATTCATGAATGGAGCTGTAAAGACAAGAAGGCGTGGCAATTGCTTTCAACAGAAGGAATCATCTGAAGCAAAAGTTAAGAAGTCAAGGCTTTCGTGCCCGCCGCCCCTGAAGGTCGGAAAGGAAAAACGAGGAGACAGCATCCAAGCTCTTCAAAGGTTAGTAGCACCTTTTGGGAAGACGGATACAGTCTCCGTACTGACCGAAGCTATTGGCTACATCCACTTCCTTCATGATCAAATCCAGACATTGAATGTGCCTTACATGAAGTA 278 0.4568 MSAFMNGAVKTRRRGNCFQQKESSEAKVKKSRLSCPPPLKVGKEKRGDSIQALQRLVAPFGKTDTVSVLTEAIGYIHFLHDQIQTLNVPYMK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01575 92 CDD bHLH_AtbHLH_like 43 86 IPR045239 -
Bva11g01575 92 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 2 92 - -
Bva11g01575 92 MobiDBLite consensus disorder prediction 15 29 - -
Bva11g01575 92 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 90 IPR036638 GO:0046983
Bva11g01575 92 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 30 79 IPR011598 GO:0046983
Bva11g01575 92 PANTHER TRANSCRIPTION FACTOR BHLH110-LIKE 2 92 - -
Bva11g01575 92 MobiDBLite consensus disorder prediction 15 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01575 Bva-Chr11 14721962 14722614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01575 13 92 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 59.524 5.13e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01575 - - gmx:100785177 121.324