Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01566 ATGGCGGGTTTATTTTCATTAGGCggtggaggaggaggaagagggAGCAGTAACCAAGAGGAAGGGCAGCAGCACCATCATCATCCAGCCACGGAAATTACTCCTCCAGAGAGCTTATTTTGGTACAAGAATAATGAAGATGTTTCTTCTTACAGAGGGTTTGAACTATGGCAGCAGCATGAGCAGCTCCTCCCCCAAGCACGACAACTCCATAATCAGCAAGATCTTTACTCGTCGGCTGCAGCGTTAGGAGTGGGACCCAGTAGGAGCTCAATCAACGTCTCCGATGATCAGTCGTCGTCGAGATCGGGGTTCATGGTGATGCGAAGCAGCGGAGGAATAAGCTGCCAAGACTGTGGTAACCAAGCGAAGAAAGACTGCCCTCACATGCGGTGCAGGACTTGTTGCAAAAGCCGAGGCTTCGATTGTCAAACCCATGTCAAAAGCACTTGGGTTCCAGCCTCTAGGCGTCGCGAGCGACAACAGCAACTAGCTTCTTTACAGCAGCAAGAGCAGCAACTGCAACTCGGCGGAGACAATCCGAAAAGGCAGAGAGATAGTAATCCAAGCGCTTCTGCTCTAGCCTGCACTCGCATACCAACAAACCCCTCATCCTCAGCGTTAGAGCATGGAAATTTTCCAGCCATGGTGAGCTCTTCTGCGGAGTTTCGTTGCGTGCGCGTTAGCCCCGTGGACGACGCTGACGACCAGTACGCATATCAGACAGCCGTAAACATTGGAGGACATGTGTTCCGAGGAATTCTCTACGACCATGGCCCCGACAGTAATTACATGCCATCAGAGGGTTCTTCCGGCGCTATTGGCGGCGTTCAACCTTTGAATCTTATTTCTGCTGCACCAACCCTACCCTCTGGCGGTGGCGATGCTATGGTTTCTTCTACGGGGGCACTGGTGGATCCTTCTTCTTTATATCCAGCTCCACTTAACACATTCATGGGTGGTAGTGGTACGCAATTCTTCCCACATCCAAGATCTTG 998 0.502 MAGLFSLGGGGGGRGSSNQEEGQQHHHHPATEITPPESLFWYKNNEDVSSYRGFELWQQHEQLLPQARQLHNQQDLYSSAAALGVGPSRSSINVSDDQSSSRSGFMVMRSSGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASRRRERQQQLASLQQQEQQLQLGGDNPKRQRDSNPSASALACTRIPTNPSSSALEHGNFPAMVSSSAEFRCVRVSPVDDADDQYAYQTAVNIGGHVFRGILYDHGPDSNYMPSEGSSGAIGGVQPLNLISAAPTLPSGGGDAMVSSTGALVDPSSLYPAPLNTFMGGSGTQFFPHPRS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01566 332 MobiDBLite consensus disorder prediction 154 191 - -
Bva11g01566 332 MobiDBLite consensus disorder prediction 1 37 - -
Bva11g01566 332 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 213 260 IPR006511 -
Bva11g01566 332 PANTHER PROTEIN SHI RELATED SEQUENCE 2 1 330 - -
Bva11g01566 332 Pfam Domain of unknown function (DUF702) 113 261 - -
Bva11g01566 332 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 330 IPR007818 GO:0003700|GO:0006355
Bva11g01566 332 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 115 157 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01566 Bva-Chr11 14683261 14685762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01566 1 321 C2H2 Transcription Factor Family AT5G66350 51.312 1.25e-94 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bva11g01566 DUF702 7.4e-67 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01566 - - tcc:18610831 377.867