Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01551 ATGATGCTCAAGCTGTTCTTCCTTATATTGCTCTTAGaattttcttctacttcttctCGGATAAATGGGTCAAATGGAACAGTGATGGTTGAACAAGCATACCGTAATTGGGTAAAAGGCTTTGGGTCATCCAAGCTCAAGCACTATCGATTTCAGAAGGCAAAAAACAAGTTAGACCCCTGTCTAACTCTGAAAGTTAATAAAAACCCAAAGTTAGGTGACTTTGTATCGGTTCAGAAAGCTATATCTTCGCTTCCACAAGTAAATACTTGTCGTGTGGTCATCTCTATCAGTTCTGGTATTTACAGGGAGAAGGTTGAGATTCCTGCAACTATGGCTTACATTACCTTGGAAGGTGAGAAGGTAGACAAGACGATTATCGAGTGGGATGATACAGCAGACAGAATGGGACAGAGTGGGCATCCATTGGGTACCTACGCTTCTGCAACGTTTGCAGTCGATGCCCCATACTTCATTGCAAAAAACATCACCTTCAAGAATAGAGCACCAAAACCTGCTGCAGGAGCTCTGGGAAGGCAAGCAGTGGCTCTAAGAATCTCTGGTGATGCAGCAGCCTTCGTACACTGCAAATTTATTGGAGCACAAGACACGCTATACGACCACGTAGGCAGGCACTACTTCAAGAATTGTTACATCGAAGGCTCGGTGGATTTCATATTCGGAAATGGTCTCTCACTCTACAAGGACTGCCATTTGCATGCCATTGCTAGAAGCTATGGAGCCTTGACAGCCCAGAAGAGACAGAGCTTCCTTGAGGACACTGGCTTCTCCTTTGTCAACTGCAAGGTCACTGGCTCAGGTGCCCTCTTCCTTGGGAGAGCGTGGGGCACTTTCTCTACAGTCGTCTTTGCGTACACATACATGGACAAGATTATCATTCCTAGAGGATGGTCCAACTGGGGAGACAAGAACAGGGAAACGACCGTGTTCTATGGACAATACAAATGTTCGGGACCAGGAGCTCATTCTAGAGGGCGCGTCACATGGTCTAGGGAGCTCACTCGGGAGGAAGCAGCACCATTTCTGTCACTCAATTTTATTGATGCTGGTCAGTGGCTTCACAATCTGCGATA 1094 0.4561 MMLKLFFLILLLEFSSTSSRINGSNGTVMVEQAYRNWVKGFGSSKLKHYRFQKAKNKLDPCLTLKVNKNPKLGDFVSVQKAISSLPQVNTCRVVISISSGIYREKVEIPATMAYITLEGEKVDKTIIEWDDTADRMGQSGHPLGTYASATFAVDAPYFIAKNITFKNRAPKPAAGALGRQAVALRISGDAAAFVHCKFIGAQDTLYDHVGRHYFKNCYIEGSVDFIFGNGLSLYKDCHLHAIARSYGALTAQKRQSFLEDTGFSFVNCKVTGSGALFLGRAWGTFSTVVFAYTYMDKIIIPRGWSNWGDKNRETTVFYGQYKCSGPGAHSRGRVTWSRELTREEAAPFLSLNFIDAGQWLHNLR 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01551 364 Pfam Pectinesterase 73 355 IPR000070 GO:0030599|GO:0042545
Bva11g01551 364 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
Bva11g01551 364 SUPERFAMILY Pectin lyase-like 63 361 IPR011050 -
Bva11g01551 364 PANTHER PECTINESTERASE 22 361 - -
Bva11g01551 364 Gene3D - 62 364 IPR012334 -
Bva11g01551 364 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 22 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01551 Bva-Chr11 14593224 14594803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01551 1 360 Carbohydrate Esterase AT5G47500 44.875 2.06e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01551 K01051 - jre:109015976 548.51