Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01547 ATGCGAACGCTTTGTGACGCTTGTGAGAGCGCGGCAGCAATCGTGTTCTGCGCTGCTGACGAGGCTGCTCTCTGCCGTGCCTGCGACGAAAAGGTTCACATGTGTAATAAGCTAGCAAGCCGGCATGTAAGAGTTGGTCTTGCAAGTCCAAGTGATGTGCCTCACTGTGACATATGTGAAAATGCACCCGCTTTCTTTTATTGCGATACGGATGGAAGTTCTCTTTGTTTGCAATGTGATATGATAGTTCATGTTGGAGGTAAAAGAACGCATGGAAGATATCTTCTTTTGAGGCAGAGAGTTGAGTTTCCAGGGGACAAGCCCGGTCAAGGGGAAAATCCAGCTTCACAACCTATGGAGCCTGGTGAGACTATAAGAGGACAAAATCCGCTGccgaaaatgaaaataggggagaaacaacaaaatcacAGGATGCCTACGGTTCCGACACCAGAATCTGATGCTGATGGGCATGCCAAGATGGAAACTGAAATGATTGATTTGAACATGAAGCCTAACAGAATACATGAGCATGCTTCAAATAATCAGcCATA 554 0.4368 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPHCDICENAPAFFYCDTDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGQGENPASQPMEPGETIRGQNPLPKMKIGEKQQNHRMPTVPTPESDADGHAKMETEMIDLNMKPNRIHEHASNNQP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01547 184 CDD Bbox1_BBX-like 4 47 - -
Bva11g01547 184 MobiDBLite consensus disorder prediction 155 174 - -
Bva11g01547 184 CDD Bbox1_BBX-like 56 96 - -
Bva11g01547 184 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bva11g01547 184 SUPERFAMILY B-box zinc-binding domain 48 86 - -
Bva11g01547 184 SMART bboxneu5 51 96 IPR000315 GO:0008270
Bva11g01547 184 SMART bboxneu5 1 47 IPR000315 GO:0008270
Bva11g01547 184 MobiDBLite consensus disorder prediction 103 184 - -
Bva11g01547 184 Gene3D Classic Zinc Finger 2 92 - -
Bva11g01547 184 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Bva11g01547 184 Pfam B-box zinc finger 53 90 IPR000315 GO:0008270
Bva11g01547 184 PANTHER SALT TOLERANCE-LIKE PROTEIN 1 183 - -
Bva11g01547 184 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Bva11g01547 184 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01547 Bva-Chr11 14579037 14581700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01547 1 183 C2C2-CO-like Transcription Factor Family AT4G38960 61.749 2.22e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bva11g01547 zf-B_box 1.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01547 - - gmx:100780544 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00825 08 4241202 4243920 Bva11g01547 11 14579037 14581700 BWGD