Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01543 ATGATACGCCCTGCACCTCTTATTCTTCTCATGCTGCTCTTCACACCTTTTCTATCGTGCGCCCATCGTAGAGCCGTTGAGATCGAAGCCTTGACGTCTTTTAAGCTCAATCTGCTTGATCCACTTGGAGCTCTTGATGGCTGGGATCCATCCACGCCGGCGGCTCCATGTGACTGGCGTGGAATTGCCTGCAACGACGACCGAGTCACTGAGCTGCGATTACCTATGCTTCACCTCAGTGGTCGGCTCACTGATCGGCTTTCGGACTTGCGTATGCTGCGAAAGCTAAGCCTTCGTTCCAATTCCTTCCACGGGACCATTCCTTCGTCACTTGGCAAATGTACACTCTTACGCGCCGTCTTTTTGCAGTACAACTCACTCTCCGGCAACCTTCCACCGGAGATTGGAAACCTCACtggtcttttaatttttaacgtTGCACAAAACCATCTCTCAGGCAAAATCCCCGGAAGCCTTCCTTTAAGTCTCAAGTACTTTGACCTCTCATCCAACGCCTTCTCCGGCGAGATTCCGAGAGCCATTGGCAAACTATCTCAGCTGCAGCTAATTAACTTGTCGTACAACCAGTTCACCGGTGAAATTCCGGCGAGCTTTGGGGAGCTTCAACTGCTCCAATACCTCTGGCTTGATCACAATTTCCTTCGGGGAACTCTACCTTCGGCACTCGCGAATTGCTCTTCGCTTGTTCATCTGAGTGTGGAAGGAAATGCTCTTGCAGGTGTGATCCCAGCGGCGATTCCAGCTCTTCCGAAGCTTCAGGTGATATCCTTGTCGCGGAACAATCTTACTGGTTCCATTCCTGTTTCCATTTTCTGCAATGTTTCTGTTTATAAGCCGTCCCTTCGAATCGTTCAACTAGGATTTAATGCTCTCACCCATTTTGTTGGGCCTGAGACAGAAACGTGCTTCGGTGTTATTGAAGTTCTGGATATTCAACATAATCATATACGGGGGAAATTTCCCATGTGGTTAACGAATTTGTCCACTGTAAAAGTGCTTGATGTTTCGAGTAATGCACTTTCTGGCGAGGTTCCACCAGAAATAGGAAACCTAACGAAATTGGAGCAGTTAAGGATGGCCAACAATTCATTCACAGGCATGATTCCGGTGGAAATCAAGAAATGCAGGTTCCTACGTGTTGTTGATTTTGAAGGAAATCGATTTTCTGGAGAacttcctttgttttttggtgATATGACAGGTCTAGAGGTGCTTTCCCTCGGTGGGAATCTCTTCTCTGGTTCAGTTCCAGTGAGTTTCGGTAACCTGTCATCGCTTGAAACCTTGAGTTTGAGAGGCAATAGATTGAATGGAATTATGCCCGAGGAGATAATGGGAATGAGTAATTTGAGTAGGCTGGACCTTAGCGGAAACAAGTTCACAGGTCAAGTTTCTGTAGGTATTGGGAATCTGAGTAGATTAATGGTTCTCAATCTGAGTAGCAATGAATTATCAGGGAAAATTCCGTCCACTTTGGGGAGTCTGTTTAGGTTAGCTACACTCGACTTGAGCAAGCAGAATCTCTCTGGAGAATTGCCTTTTGAACTTTGGGGGCTGCCAAATCTACAAGTTATTGCTCTGCAGGAAAATAAGTTGTCCGGTAATGTTCCTGAAGGCTTTAGCAGTTTAGTTAGTCTGCGATATGTGAACCTCAGCTTTAATGCTTTTTCTGGAAATATTCCAGAAAACTATGGTTTTCTAAGATCGCTGGTTGTTCTTTCATTGTCAGCTAATCACATTACAGGAACAATTCCTCCAGATATTGGAAACTGTTCTGATATAGAAATTCTTGAGCTTGGATCCAATTCTTTGAGAGGTCATATTCCAACTGATCTCTCACGCCTTTCCCATTTGAAAGTGCTGAATTTGAGTAGAAACAATTTAAATGGAGATCTGCCTGGGGATATCTCCAAATGCTCCTCATTAACTGCTTTATTAGTGGATCACAACCATCTCTCAGGTTCCATACCAGAGTCATTATCAGTGCTATCAAACCTATCAATATTTGATCTCTCTGCTAACAACCTTAGTGGGGAAATTCCAAGTAATATGTCTATGATCCCTGGTTTAGTGTACTTCAATGTCTCTGGGAATAACCTTGAAGGTGAGATACCACCAACGCTAGGTTCTCGGTTCAATGACGCTACTGCATTTGCAGATAATCAGAACTTATGTGGAAAACCATTGGATAGGGAGTGTGAAGATATAGAATCGAGGGAGAGGAAGAGATTGATTGTCTTAGTTGTTGTCATTGCAGTTGGAGCTGTCTTTCTGGTATTATTTTGCTGCTTCTATATTATTAGCCTTTTGAGATGGCGCAAAAGACTTAAAGAAGGGGCATCTGGTGAGAATAAAAGAAGTCCTGCTGGGATGAGTTCTGGAGCAAGTGGAGGTCGTGGCAGCACTGATAATGGTGGACCAAAACTTGTCATGTTCAATACCAAAATTACACTTGCTGAAACAATTGAAGCAACTAGGCAattcaatgaagaaaatgtGCTGAGCAGAACAAGGTATGGATTAGTATTCAAGGCCTGCTACAATGATGGAATGGTGCTTTCCGTTCGCAGGCTCCAAGACGGATCACTCGACGAAAATATGTTCAGAAAAGAAGCTGAATCCCTAGGGAAAGTGAGGCACAGGAACTTGACAGTCCTTAGAGGTTATTATGCTGGGCCACCTGACATGAGGCTCTTAGTCTATGATTACATGCCCAACGGAAACCTTGCAACCCTTCTCCAAGAAGCATCTCACCAAGATGGCCATGTACTAAATTGGCCAATGCGCCATCTCATTGCACTTGGAATTGCCCGTGGTTTAGCCTTCCTACACCAATCCTCAATGGTTCATGGCGACGTGAAGCCAACAAGTGTCCTCTTTGATGCAGATTTTGAAGCCCATTTGTCAGATTTTGGCCTAGACAGTTTAACCATAGCCACCCCAGGCGAAGCCTCCACTTCAACGTCAGTTGGCACATTGGGTTATGTATCACCAGAAGCAGTATTAACAGGGGAAGCCACGAAGGAGTCTGATGTCTACAGTTTTGGCATTGTCCTGCTCGAGCTTTTAACAGGAAAGCGACCCGTAATGTTCACACAGGATGAAGATATAGTCAAGTGGGTGAAGAAACAATTGCAAAGGGGTCAAATCACAGAGCTATTAGAGCCAGGTTTGCTTGACCTCGACCCAGAATCATCAGAGTGGGAAGAGTTCTTGTTGGGCCTCAAGGTTGGCTTACTTTGCACAGCACCAGACCCTCTGGATCGCCCAACCATGTCCGACATCGTCTTCATGCTCGAGGGTTGTCGGGTCGGCCCAGACATCCCACCCTCCGCGGATCCCACCTCTCAACATTCACCGGCGTA 3386 0.4489 MIRPAPLILLMLLFTPFLSCAHRRAVEIEALTSFKLNLLDPLGALDGWDPSTPAAPCDWRGIACNDDRVTELRLPMLHLSGRLTDRLSDLRMLRKLSLRSNSFHGTIPSSLGKCTLLRAVFLQYNSLSGNLPPEIGNLTGLLIFNVAQNHLSGKIPGSLPLSLKYFDLSSNAFSGEIPRAIGKLSQLQLINLSYNQFTGEIPASFGELQLLQYLWLDHNFLRGTLPSALANCSSLVHLSVEGNALAGVIPAAIPALPKLQVISLSRNNLTGSIPVSIFCNVSVYKPSLRIVQLGFNALTHFVGPETETCFGVIEVLDIQHNHIRGKFPMWLTNLSTVKVLDVSSNALSGEVPPEIGNLTKLEQLRMANNSFTGMIPVEIKKCRFLRVVDFEGNRFSGELPLFFGDMTGLEVLSLGGNLFSGSVPVSFGNLSSLETLSLRGNRLNGIMPEEIMGMSNLSRLDLSGNKFTGQVSVGIGNLSRLMVLNLSSNELSGKIPSTLGSLFRLATLDLSKQNLSGELPFELWGLPNLQVIALQENKLSGNVPEGFSSLVSLRYVNLSFNAFSGNIPENYGFLRSLVVLSLSANHITGTIPPDIGNCSDIEILELGSNSLRGHIPTDLSRLSHLKVLNLSRNNLNGDLPGDISKCSSLTALLVDHNHLSGSIPESLSVLSNLSIFDLSANNLSGEIPSNMSMIPGLVYFNVSGNNLEGEIPPTLGSRFNDATAFADNQNLCGKPLDRECEDIESRERKRLIVLVVVIAVGAVFLVLFCCFYIISLLRWRKRLKEGASGENKRSPAGMSSGASGGRGSTDNGGPKLVMFNTKITLAETIEATRQFNEENVLSRTRYGLVFKACYNDGMVLSVRRLQDGSLDENMFRKEAESLGKVRHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGDVKPTSVLFDADFEAHLSDFGLDSLTIATPGEASTSTSVGTLGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLDLDPESSEWEEFLLGLKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPPSADPTSQHSPA 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01543 1128 Gene3D Ribonuclease Inhibitor 160 306 IPR032675 -
Bva11g01543 1128 Gene3D Ribonuclease Inhibitor 308 379 IPR032675 -
Bva11g01543 1128 SUPERFAMILY L domain-like 28 352 - -
Bva11g01543 1128 Gene3D Transferase(Phosphotransferase) domain 1 911 1113 - -
Bva11g01543 1128 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1124 - -
Bva11g01543 1128 SUPERFAMILY L domain-like 314 577 - -
Bva11g01543 1128 SUPERFAMILY Protein kinase-like (PK-like) 815 1118 IPR011009 -
Bva11g01543 1128 Gene3D Phosphorylase Kinase; domain 1 812 910 - -
Bva11g01543 1128 SUPERFAMILY L domain-like 495 733 - -
Bva11g01543 1128 Gene3D Ribonuclease Inhibitor 25 159 IPR032675 -
Bva11g01543 1128 Gene3D Ribonuclease Inhibitor 471 749 IPR032675 -
Bva11g01543 1128 SMART LRR_typ_2 334 358 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 406 429 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 454 477 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 526 549 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 430 453 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 90 114 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 670 694 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 256 280 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 478 502 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 622 646 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 208 231 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 184 207 IPR003591 -
Bva11g01543 1128 SMART LRR_typ_2 574 598 IPR003591 -
Bva11g01543 1128 MobiDBLite consensus disorder prediction 793 807 - -
Bva11g01543 1128 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Bva11g01543 1128 Gene3D Ribonuclease Inhibitor 380 470 IPR032675 -
Bva11g01543 1128 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Bva11g01543 1128 ProSiteProfiles Protein kinase domain profile. 835 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01543 1128 Pfam Protein kinase domain 844 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01543 1128 MobiDBLite consensus disorder prediction 788 813 - -
Bva11g01543 1128 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 8 1124 - -
Bva11g01543 1128 Pfam Leucine rich repeat 602 659 IPR001611 GO:0005515
Bva11g01543 1128 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01543 Bva-Chr11 14558742 14563402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01543 7 1128 Receptor kinase-like Gene Family AT4G36180 68.166 0.0 1481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Bva11g01543 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01543 - - gmx:100795838 1790.01