Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01541 ATGATGGAGTCGATGGAGTCATGTGTCCCACCCGGGTTTCGGTTCCACCCAACTGATGAAGAACTTGTTGGCTACTATCTCAGGAAGAAAGTCGCTTCACAGAAGATTGATCTTGACGTTATCAGAGAGATCGATCTCTATCGGATTGAACCATGGGATCTACAAGAGAGATGCAGGATCGGTTATGAAGAACAGAATGATTGGTATTTCTTCAGCCACAAGGACAAAAAGTATCCAACTGGGACAAGGACTAACAGAGCTACCATGGCTGGGTTCTGGAAGGCAACAGGGAGAGACAAGGCAGTGTACGATAAGACAAAACTCATAGGTATGAGGAAGACCCTTGTCTTCTACAAAGGAAGAGCTCCTAACGGACAAAAAACTGATTGGATCATGCATGAATATAGACTAGAATCTGATGAGAACGGACCTCCACAGGAAGAAGGATGGGTTATATGCAGAGCATTCAAGAAAAGAACCACTGGTCAAACGAAGACAATTGAGGGATGGGATTCAAGCTATTTCTATGAAGAAACAAGTGGGGTCAGTTCGGTGGTTGATTCAGTTGATTTTATCACAAGGCAGCCTCAGAGCTTTTTACCTCAAAATTTACTGTGCAAGCATGAGATAGAAATGGATAACACGAGCTTCATGCACTCAGACCAATTTGTAAAGCTTCCTCAGTTACAAAGCCCGTCTTTGCCATTAATAAAGAAACCAAGCTCAGTGTCTTTAATATCAGACAATAACCAAGAAAATGAGCAGAATAGGTTATCCAACACCAGCAAGAAAGTGACTGACTGGAGAGCTCTTGACAAGTTTGTGGCTTCTCAGTTGAGTCATGAAGTCAGGCACGAACTTGATGGAGTGCCTAACTTTGAAAGCCATAATAGCTCGGACATGGCAGCATTGCTGTTACTGCAGAATAGTAGAGAGGAAGTGAGCAAGTTAAGCCCATTTTTAAATACAAGCTCAGACTGTGATATTGGGATATGCgtatttgaaaaatg 1010 0.4228 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNDWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQEEGWVICRAFKKRTTGQTKTIEGWDSSYFYEETSGVSSVVDSVDFITRQPQSFLPQNLLCKHEIEMDNTSFMHSDQFVKLPQLQSPSLPLIKKPSSVSLISDNNQENEQNRLSNTSKKVTDWRALDKFVASQLSHEVRHELDGVPNFESHNSSDMAALLLLQNSREEVSKLSPFLNTSSDCDIGICVFEK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01541 336 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Bva11g01541 336 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Bva11g01541 336 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 314 - -
Bva11g01541 336 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Bva11g01541 336 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Bva11g01541 336 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 5 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01541 Bva-Chr11 14544062 14548208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01541 2 335 NAC Transcription Factor Family AT2G18060 63.488 4.46e-165 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva11g01541 NAM 6.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01541 - - aprc:113869508 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00830 08 4279096 4283292 Bva11g01541 11 14544062 14548208 BWGD