Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01529 atgGAAcctcaacaacaacagcaactCTCACTAAACGAGGATGGCGGCAGTGGAAAAGGGGGATTTCTGTGCAGGCAAAGTAGTACACGGTGGACTCCCACTACCGACCAGATAAGAATATTGAAGGAACTTTACTACAATAATGGAGTTAGGTCCCCAAGTGCTGAGCAGATTCAGAAGATCTCTGCTAGGCTGAGGCAGTACGGCAAGATTGAAGGCAAGAATGTTTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATGTTCCCATGCAAAGAACACCTGCACCTAATGCTGCTACTGCTAATTGGAAACCTCAAGAACCCATTAATCACTCCAAGTATTATAGCATATCTTCTAATGGGGTGTCTTctgctccttcttcttcttctggttCTGGGATGGTTACTCTGGGGCAGATGGGCAACTGTGGCTATGGAGCTTTGACTATGGAGAAGAGTTTTAGGGACTGCTCTATATCAGCTAGAGGTAGCAGTTTAAGCCACAACTTGGGATGGGTTGGTGTGGATCCATATTCCTCAACCTACACCAgtttatttgacaaaataaggCCAAGTGCTGAAGAAACCTttgaagaagaacaagagaaTGGTGCCCCTGAGCTTGAAACCCTTCCACTTTTCCCTATGCACAATGAGGACATCCGTGGCTGCTGCAACCTTAGGTCTGAATATTCACCATACTATGGTGGCTGGTATCACACTGATCATGATGGCTACAAGAACGGTTCTCGCACTTCACTTGAGCTCAGTCTCAACTCCTACACTCGTAGATCCCCAGAGTCCAATTG 836 0.4187 MEPQQQQQLSLNEDGGSGKGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSAEQIQKISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDVPMQRTPAPNAATANWKPQEPINHSKYYSISSNGVSSAPSSSSGSGMVTLGQMGNCGYGALTMEKSFRDCSISARGSSLSHNLGWVGVDPYSSTYTSLFDKIRPSAEETFEEEQENGAPELETLPLFPMHNEDIRGCCNLRSEYSPYYGGWYHTDHDGYKNGSRTSLELSLNSYTRRSPESN 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01529 278 ProSiteProfiles 'Homeobox' domain profile. 24 90 IPR001356 GO:0003677
Bva11g01529 278 MobiDBLite consensus disorder prediction 99 113 - -
Bva11g01529 278 CDD homeodomain 29 91 IPR001356 GO:0003677
Bva11g01529 278 Gene3D - 28 94 - -
Bva11g01529 278 SUPERFAMILY Homeodomain-like 23 95 IPR009057 -
Bva11g01529 278 MobiDBLite consensus disorder prediction 89 113 - -
Bva11g01529 278 PANTHER PROTEIN WUSCHEL 1 272 - -
Bva11g01529 278 Pfam Homeodomain 28 89 IPR001356 GO:0003677
Bva11g01529 278 SMART HOX_1 26 94 IPR001356 GO:0003677
Bva11g01529 278 MobiDBLite consensus disorder prediction 1 27 - -
Bva11g01529 278 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 272 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01529 Bva-Chr11 14496535 14497961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01529 22 229 Wox Gene Family AT2G17950 44.898 6.97e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva11g01529 Homeodomain 6.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01529 - - vra:106776674 382.874