Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01521 atggaTCAGTGGAAGCCTGAAGATTTGCCTAAATCTGTGCCTGTTATAGCAGATTTAGCTCCTTCTACTTCCCTGCAACCTCATCCTGTGTCCTCTAATCGCTTGCAGAACTCGCATCCTGAAGCCAGGCAGAGGCCTGAAGTGGAAGCACAGGATCCAATTGCTGCAAGAAAAGTTCAGAAGGCCGACCGGGAGAAGCTGAGGAGGGATCGACTAAATGAACATTTCCTGGAGTTGGGAAACACATTAGACCCGGATAGGCCAAAGAATGATAAGGCAACCATCCTTACAGACACAATCCAAGTGCTAAAGGAGTTAAGTGCTGAAGTCAATAGACTAAAGACTGACCATGCAACACTTTCTGAAGAATCACGTgaaCTAATGCAAGAGAAGAATGAACTCAGAGAAGAGAAGGCAAGTTTAAAGGCTGATGTTGAAAATCTTAATGTCCAGTATCAGCAGAGAGTGAGAGTCATGTTCCCATGGACCGCAGTTGACCATTCGGTTGTCATGGCTCCACCTTATTCATATCCAGTTCCATTAGCCATCCCTCCTGGTCCAATTTCCATTCAGCCATTTCCCTTCTTTGGAAATCAAAATCCGGGTCCAATTCCTAATCCCTGTTCAACGTACATTCCGTTCTCAGCTCCAGCAAATCCGCCGGTTGAGCTGCCATCTGCCCAGTTTGCTTCCACATCCCACATTTCAAGCAAACAAGAATCCAGAGGCAAGTCACCAGATCGCGAGAGGCCCGGCAATGCTGAAAGATGTAGTGAGTCTAATGATGTGGCTACAGAGCTTGAACTTAAGATGCCCGGATCATCAACACAGCAGGATTCCTCTTCTGGAGGAAGGAAGGGCAAGCATTcacagaagaaagagagaaatatcACAAATGGGAGTGCGTCAAGCAGGTATTCTTCATCTCAAGGTCTTCAAGATAGCTCCAACAGTGTGGGTGACATCCCAAGGCCCGACAACTG 983 0.4578 MDQWKPEDLPKSVPVIADLAPSTSLQPHPVSSNRLQNSHPEARQRPEVEAQDPIAARKVQKADREKLRRDRLNEHFLELGNTLDPDRPKNDKATILTDTIQVLKELSAEVNRLKTDHATLSEESRELMQEKNELREEKASLKADVENLNVQYQQRVRVMFPWTAVDHSVVMAPPYSYPVPLAIPPGPISIQPFPFFGNQNPGPIPNPCSTYIPFSAPANPPVELPSAQFASTSHISSKQESRGKSPDRERPGNAERCSESNDVATELELKMPGSSTQQDSSSGGRKGKHSQKKERNITNGSASSRYSSSQGLQDSSNSVGDIPRPDN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01521 327 MobiDBLite consensus disorder prediction 1 67 - -
Bva11g01521 327 PANTHER TRANSCRIPTION FACTOR BHLH121 30 325 IPR044579 GO:0003700|GO:0055072
Bva11g01521 327 CDD bHLH_AtILR3_like 61 135 - -
Bva11g01521 327 MobiDBLite consensus disorder prediction 270 284 - -
Bva11g01521 327 SMART finulus 62 112 IPR011598 GO:0046983
Bva11g01521 327 PANTHER TRANSCRIPTION FACTOR BHLH11 30 325 - -
Bva11g01521 327 MobiDBLite consensus disorder prediction 230 327 - -
Bva11g01521 327 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 56 106 IPR011598 GO:0046983
Bva11g01521 327 Coils Coil 96 151 - -
Bva11g01521 327 MobiDBLite consensus disorder prediction 24 39 - -
Bva11g01521 327 MobiDBLite consensus disorder prediction 40 67 - -
Bva11g01521 327 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 57 126 IPR036638 GO:0046983
Bva11g01521 327 Pfam Helix-loop-helix DNA-binding domain 57 106 IPR011598 GO:0046983
Bva11g01521 327 Gene3D - 54 157 IPR036638 GO:0046983
Bva11g01521 327 MobiDBLite consensus disorder prediction 240 256 - -
Bva11g01521 327 MobiDBLite consensus disorder prediction 296 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01521 Bva-Chr11 14443337 14446712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01521 47 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 53.725 2.36e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva11g01521 HLH 4.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01521 - - csv:101222613 433.721