Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01518 ATGGCGGATATAGTGAAGCAAATCTTGGCAAAGCCGATCCAATTAGCTGACCAAGTCACTAAGGCTGCTGATGAAGCTAGCTCTTCATTCAAGCAGGAATGTGCAGAGCTCAAATCCAAAACAGAGAAGCTTGCAGCGCTTCTCAGGCAAGCTGCAAGAGCCAGCTCCGACCTCTATGAGCGCCCTACACGGCGGATCGTTGAAGACACCGAACAGGTCCTTGACAAAGCTCTTCAACTGGTGCTCAAATGCCGCACCAATGGCCTCATGAAGCGCGTCTTCACCATTATCCCCGCCGCAGCCTTTCGTAAAATGTCTTCCAGTTTGGAGAATTCAATAGGTGATGTGTCTTGGCTTCTCCGTGTCTCTACTCCTGTGGAGGTTCGCGGCGACGAGTATCTGGGTCTTCCTCCTATTGCGGCAAATGAACCAATCCTGGGTCTCATATGGGAGCAGATTGCTATCCTCCATACAGGGTCTCTCGAAGATCGATCTGATGCGGCGGCTTCGCTTGTGACACTTGCTCGGGACAATGATCGATATGGGAAATTGATCATCGAGGAAGGGGGAGTTGGACCCTTActgaaattgattaaagagGGTAAGATGGAAGGTCAGGAGAATGCTGCTAGATCAATTGGGCTTCTTGGTCGTGACCAGGAAAGCGTTGAGCTCATGATCCATGCTGGTGTGTGCTCCGTGTTTGCGAAAATTCTCAAAGAAGGTCCAATGAAAGTCCAAGCGATGGTAGCTTGGGCTGTCTCACAGCTTGCAGCGAATTATCCAAAATGTCAAGATCTTTTTGCCCAGCACAATATAATACGCTTACTTGTCAGCCATCTTGCTTTCGAAACAGTTCAAGAACACAGTAAGTATGCCATCACTAGCATAAAACCCACATCGATTCACGCAGTTGTGATGGCAAGTAATAACTCCAATGACAATATCACGAAAAATGCCAATGATGACGATGACAAGCAACTCCAGAATCGAAAACCGGGAAGCTTGGGTAATAAAACCACAAATCTGATGCATAATGTGGTCACAAGTACAATGGCAATGAATGCTGCAGCCAAGCTGTCCAAGCAAGTAAATGGAGCAAATCAGAACCATCAACCAGATCAACCCAAAAGCAACGGCCTTACCAATGGCAAGCAAAATCATCTAGCCCTTCACCCACACAACCATTCATATTCGGGAATTAACATGAAGGGAAGGGAACTTGAAGACCCCCAGACTAAGGCCAAAATGAAAGCAATGTCAGCGAGAGCCCTTTGGCACCTAGCAAAGGGTAACTCACCCATCTGTCGTAGCATTACAGAATCAAGGGCTCTACTCTGTTTTGCAGTTCTCCTTGAGAAAGGGCCTGAAGAAGTACAGTACAATTCTGCCATGGCTGTGATGGAGATTACAGCAGTGGCAGAGAAAGATGCTGAATTGAGAAGATCTGCCTTCAAACCAAATTCTCCTGCTTGCAAGGCAGTTGTTGATCAATTGCTTAAGATTATTGAGAAAGCAGATTCAGACCTCCTAATTCCTTGCATCAAGACTATTGGGAATTTGGCAAGGACATTTCGAGCAACTGAGACAAGGATGATTGCTCCCTTAGTAAAACTTCTAGATGAAAGAGAGGCTGATATATCAAGGGAGGCATCGGTTGCCCTCACAAAATTTGCTTGCACAGATAATTACCTTCACCTAGATCACTCAAAGGCAATTATAAGTGCAGGTGGGGCAAAACATTTGATTCAGCTCGTATATTTTGGGGAACAGATCGTTCAAATTTCAGCATTAGTTCTACTATGCTACATTGCGTTGCATGTGCCAGACAGTGAGGAACTTGCCCAAGCAGAGGTGCTCACAGTGCTTGAATGGGCATCAAAGCAATCCTACGTAACGCAAGATGAAACGCTAGAGGCATTGTTGCAAGAAGCTAAGAGTCGGTTGGAGCTTTACCAGTCTAGAGGTTCAAGAGGATTCCATAAATTACATCAATA 1997 0.4557 MADIVKQILAKPIQLADQVTKAADEASSSFKQECAELKSKTEKLAALLRQAARASSDLYERPTRRIVEDTEQVLDKALQLVLKCRTNGLMKRVFTIIPAAAFRKMSSSLENSIGDVSWLLRVSTPVEVRGDEYLGLPPIAANEPILGLIWEQIAILHTGSLEDRSDAAASLVTLARDNDRYGKLIIEEGGVGPLLKLIKEGKMEGQENAARSIGLLGRDQESVELMIHAGVCSVFAKILKEGPMKVQAMVAWAVSQLAANYPKCQDLFAQHNIIRLLVSHLAFETVQEHSKYAITSIKPTSIHAVVMASNNSNDNITKNANDDDDKQLQNRKPGSLGNKTTNLMHNVVTSTMAMNAAAKLSKQVNGANQNHQPDQPKSNGLTNGKQNHLALHPHNHSYSGINMKGRELEDPQTKAKMKAMSARALWHLAKGNSPICRSITESRALLCFAVLLEKGPEEVQYNSAMAVMEITAVAEKDAELRRSAFKPNSPACKAVVDQLLKIIEKADSDLLIPCIKTIGNLARTFRATETRMIAPLVKLLDEREADISREASVALTKFACTDNYLHLDHSKAIISAGGAKHLIQLVYFGEQIVQISALVLLCYIALHVPDSEELAQAEVLTVLEWASKQSYVTQDETLEALLQEAKSRLELYQSRGSRGFHKLHQ 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01518 665 PANTHER - 1 661 - -
Bva11g01518 665 PANTHER ARMADILLO REPEAT ONLY 4 1 661 - -
Bva11g01518 665 Coils Coil 37 57 - -
Bva11g01518 665 Gene3D - 404 652 IPR011989 -
Bva11g01518 665 Gene3D - 2 122 IPR036537 GO:0007166
Bva11g01518 665 Gene3D - 151 328 IPR011989 -
Bva11g01518 665 SUPERFAMILY ARM repeat 153 633 IPR016024 -
Bva11g01518 665 SMART arm_5 432 472 IPR000225 GO:0005515
Bva11g01518 665 SMART arm_5 177 218 IPR000225 GO:0005515
Bva11g01518 665 SMART arm_5 566 606 IPR000225 GO:0005515
Bva11g01518 665 SMART arm_5 488 523 IPR000225 GO:0005515
Bva11g01518 665 SMART arm_5 219 259 IPR000225 GO:0005515
Bva11g01518 665 Coils Coil 635 655 - -
Bva11g01518 665 MobiDBLite consensus disorder prediction 363 387 - -
Bva11g01518 665 MobiDBLite consensus disorder prediction 313 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01518 Bva-Chr11 14424136 14426666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01518 147 278 U-box Gene Family AT2G23140 29.104 4.19e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01518 - - gmx:100794693 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01518 11 14424136 14426666 Bva08g00858 08 4417756 4420163 BWGD