Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01509 ATGAcggaaaataaagaagaaagtgcTGTATGTTCATCATCTTCAAGCTCCCGAATGGATAGCAAGTGCAGATATTTGTTTGATGGAATATGGGGTTCTGGCACTTGTTGGAATAACAGCAGCACGCCACATGGTCGACGAATTTTCCACAGAGATGTTGAAAAGGAAGAATTCCAGTATGCAAGTACTCAGTGTCTCTCATCCTACTACAGTGTATTTGTGGTGCGCCTAGCAATCATGGCCATGCTAGCTATCTTGATTGGGCTGCTCACCATACTAACATGGCATTTCACAAAGATTTATACAACAAAATCACTTAATAGCTTAGCATATGGCCTTCGCTATGAACTTCTACAGCGTCCCATCTTGCGGATGTGGAATATCTTGAATTCTACTTCTGAAATTACAACAGCTCAGGTCAAGCTCTCTCAGTATGTAATCAGAAAGTACAGCAATCCTGCCGATCATGCCGAACAAGTTGAGCAGCTCTATGAATCTATGAGGGCAGTCACATGGGCGCTGTTTGCCAGTCGCAAAGCACTAAATTCAATCACCATCAATTACAAAAACGGCTTTGTCCAGGCATTTCACAGAAATCTGAAGGATAACAACACTTTCTACATCTACTCTGATCTTGCAAATTACTCCATAGGTGCTAGTGGTCCAAATGAGATCAACTCACTCTCAGTGTCAACACATCAAGCATGGAATGACAAAGCCATCCATGGTAATAGTTCTGCAAAATGGTACCGTGAACCCCTTGATCCCTTAACAGGTGAGAAGATTGGTAAAGCTATGCAAATAGCACCAGATGATGTAATCAATATTGCTGGCCTCTCCCAAGTACCTGATGGTGCAGCCACATGGCACGTTGCAGTGAGTAAGTTTACAGATTCACCACTGCTTTCAGCAGCACTGCCAGTTTGGGACGCTTCCAATAGGAGCATTGTAGCTGTTGTGGGTGTCACAACTGCACTTTATAGTGTAGGCCAATTAATGAAAGAACTAGTGGAGTTTCATAGTGGTCATATGTATTTGACCTCTCATGAGGGTTACTTACTTGCCACTTCCACGGATGCACCTCTTCTAACAAATTCAACAAAGCCACCCAAGCTTAAGATGGCAGTTGATTGTGAAGATGACGTGATAAGATTGGGAGCAGAGTGGTTACAGAAAACCTATGGGAACAATTTCCCTCCAGGTCATGAGGTTCATGTAGAGAATGCCAAGCTTGGCAACCAGCAATATTACATAGACTCATTTTTCCTAAACTTGAAGAGACTTCCTTTGGTGGGAGTTATCCTCataccaagaaaatatatcatgGGGAAGGTTGATGAAAGAGCCTTCAAAACGCTGGTTATATTGATATCTGCATCGTTGTGTATTCTAGTCATTGGATGCGTTTGCATTTTGATACTGACAAATGGGGTGTCAAAGGAAATGAAACTAAGAGCAGAACTGATCAGTCATCTGGAAGCAAGAAGAAAGGCAGAGGCATCAAACAACTATAAAAGTCAATTTCTTGCAAATATGAGtCACGAACTGAGGACACCTATGGCTGCAGTGATTGGATTGCTTGATATTCTTATCTCCGATGATTGTCTCACCAATGAACAATATGCAACGGTTACTCAGATACGAAAATGTTCAACTGCTCTACTTCGTCTTCTTAACAATATCTTGGATCTCAGCAAGGTGGAATCTGGAAAGTTGGTACTAGAAGATGCAGAATTTGACTTGGGGAGAGAACTTGAAGGGCTTGTAGATATGTTTTCTGTGCAGTGCATTAACCATAATGTGGAGACTGTTCTAGACCTGTCTGATGATATGCCAAAGGTGGTTCGGGGTGATTCTGCAAGGGTGGTTCAAATTTTTGCAAACTTAATCAACAATTCCATCAAGTTTACTGCATCGGGTCACATAATTCTGCGAGGATGGTGTGAAAACTCAAATTCTTGGAGTGATAATGCAAATTTTCCTCTTGATCAGAAGAAACCACGGTCTGCTCAAAAGATCAGAGTAAACCACGTAAAGAAGTCATCCAAGAAAGACAACAAAATGATTCTTTGGTTTGAAGTTGACGACACAGGCTGTGGTATTGATCCAAGTAAATGGGATTCTGTTTTTGAAAGCTTTGAGCAAGCAGATCCATCAACTACTAGACTgCATGGAGGCACAGGTCTGGGACTTTGCATTGTCAGAACTTTGGTTAATACGATGGGGGGAGATATCAAGGTCGTCAAAAAGGAGGGCCCAGGAACTCTAATGCGGTTATCCCTGCATCTAACTGCACCCATGGATGCCACAGAACAACATTATCAAGTAGATTTTGCAGACAATGGCTTAGTGGTGTTGCTGGCACTGCACGGGAGCATGAGTCGATCAATCACATCTAAGTGGTTACAGAAAAACGGAGTGTGCACTATGGAGGCATCAGAATGGAATGGACTGACACAAATTCTAAGGGAGCTCTTTCGTGCAAGTTCAGTCCAGAATAATAGCTTTGATATACAATACCCAGTAATTGAGGCTTTCAAGGCTAAACTACTCAAGATACAAGAAATGGTGAACCCAACTTTTGTCATTGTTGTTGACATAGGGCTACTTGACTTGAGCACTGATATATGGAAGGAACAGCTTAACTTCCTTCACAAGTACTTCGGGAGAGCGAAGTTCGTATGGCTTCCAAATCATGACACCTCCAATACATTAAAGATGGAGCTGCGTAGGAAAGGACATGAACTGATGGTTAACAAACCCCTTTACAAGGCAAAATTGGTTCATATTTTGGAAGGTATCATACAAGAGAGAAATCTTGAGTTGCAGAAGAAAAGTATAGCTGCTCCAAGAATTACAACGAAAGAGGGTGAACTACATGAGTTTGTTGAGATTAATTCTACTCATTTTGATGCTACTAGCTCTGATGGTTCTGACATATCTGATATGAGTGGTTCCAATCCTAGCAGTGTAAACGGAGAAAACATTGCTAAATCATGTCCATCGTCACAATGCCAGACCATTAACAACTGCCTAGTTGGATTAACCGATGAATATCCAGAAGATAATAATTCAAGGAAAGAGGAGTCATGTCAAACCAGCCCCAATTCCCATGATGCCACTGAAGATGCAGAACCAAATATAATGTCCACTAAACAAGCATCCTTTCCGACAGAAACTGAATGCGAAAATTCTGAAGGTGGTGAAACACGCAAGGCCAATAGCTCAAGTAAAGCAGTGAATGGGAAGAAACCTCTTGATGGCTTGAGGATCTTGCTTGCAGAAGATACTCCAGTGCTTCAAAGGGTCGCAACCATAATGCTTGAAAAAATGGGAGCCATAGTTGTTGCAGTTGGTGATGGGCTGCAAGCAGTGGAGGCTCTAAATTGCATGATTGGTGATGGAGATTGTAGAAGGGAATCTCCTCTGAAGGAAAGAAACACAAGACCTCAAATAGAAATTTCCAATAGCCCTGCATATGACTTGGTCCTAATGGATTGTCAGATGCCGAAGATGGATGGTTatgaaacaacaaaagcaaTCAGGAAATCAGAAGTGGGTTCTGGCTTGCACATTCCCATTGTTGCTCTTACAGCCCATGCAATGTCATCAGATGAAGCCAAATGCTTGGAGGTGGGCATGGATGCTTATTTAACAAAACCAATTGACTTCAAGTTAATGGTGTCCACCATTCTTTCCCTCACCAAAAGAACTCCATG 3719 0.4144 MTENKEESAVCSSSSSSRMDSKCRYLFDGIWGSGTCWNNSSTPHGRRIFHRDVEKEEFQYASTQCLSSYYSVFVVRLAIMAMLAILIGLLTILTWHFTKIYTTKSLNSLAYGLRYELLQRPILRMWNILNSTSEITTAQVKLSQYVIRKYSNPADHAEQVEQLYESMRAVTWALFASRKALNSITINYKNGFVQAFHRNLKDNNTFYIYSDLANYSIGASGPNEINSLSVSTHQAWNDKAIHGNSSAKWYREPLDPLTGEKIGKAMQIAPDDVINIAGLSQVPDGAATWHVAVSKFTDSPLLSAALPVWDASNRSIVAVVGVTTALYSVGQLMKELVEFHSGHMYLTSHEGYLLATSTDAPLLTNSTKPPKLKMAVDCEDDVIRLGAEWLQKTYGNNFPPGHEVHVENAKLGNQQYYIDSFFLNLKRLPLVGVILIPRKYIMGKVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMKLRAELISHLEARRKAEASNNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVRGDSARVVQIFANLINNSIKFTASGHIILRGWCENSNSWSDNANFPLDQKKPRSAQKIRVNHVKKSSKKDNKMILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRTLVNTMGGDIKVVKKEGPGTLMRLSLHLTAPMDATEQHYQVDFADNGLVVLLALHGSMSRSITSKWLQKNGVCTMEASEWNGLTQILRELFRASSVQNNSFDIQYPVIEAFKAKLLKIQEMVNPTFVIVVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWLPNHDTSNTLKMELRRKGHELMVNKPLYKAKLVHILEGIIQERNLELQKKSIAAPRITTKEGELHEFVEINSTHFDATSSDGSDISDMSGSNPSSVNGENIAKSCPSSQCQTINNCLVGLTDEYPEDNNSRKEESCQTSPNSHDATEDAEPNIMSTKQASFPTETECENSEGGETRKANSSSKAVNGKKPLDGLRILLAEDTPVLQRVATIMLEKMGAIVVAVGDGLQAVEALNCMIGDGDCRRESPLKERNTRPQIEISNSPAYDLVLMDCQMPKMDGYETTKAIRKSEVGSGLHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDFKLMVSTILSLTKRTP 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01509 1239 PANTHER TWO-COMPONENT HISTIDINE KINASE 19 1236 - -
Bva11g01509 1239 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 559 761 IPR036890 -
Bva11g01509 1239 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 617 764 IPR003594 -
Bva11g01509 1239 Pfam Response regulator receiver domain 1154 1230 IPR001789 GO:0000160
Bva11g01509 1239 CDD REC_hyHK_CKI1_RcsC-like 1091 1231 - -
Bva11g01509 1239 SUPERFAMILY CheY-like 1087 1236 IPR011006 -
Bva11g01509 1239 Pfam His Kinase A (phospho-acceptor) domain 505 570 IPR003661 GO:0000155|GO:0007165
Bva11g01509 1239 ProSiteProfiles Response regulatory domain profile. 1090 1235 IPR001789 GO:0000160
Bva11g01509 1239 Gene3D - 492 571 - -
Bva11g01509 1239 ProSiteProfiles Histidine kinase domain profile. 511 765 IPR005467 -
Bva11g01509 1239 SMART REC_2 1089 1231 IPR001789 GO:0000160
Bva11g01509 1239 PRINTS Bacterial sensor protein C-terminal signature 690 704 IPR004358 GO:0016310|GO:0016772
Bva11g01509 1239 PRINTS Bacterial sensor protein C-terminal signature 749 762 IPR004358 GO:0016310|GO:0016772
Bva11g01509 1239 PRINTS Bacterial sensor protein C-terminal signature 708 718 IPR004358 GO:0016310|GO:0016772
Bva11g01509 1239 PRINTS Bacterial sensor protein C-terminal signature 725 743 IPR004358 GO:0016310|GO:0016772
Bva11g01509 1239 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 491 571 IPR036097 GO:0000155|GO:0007165
Bva11g01509 1239 MobiDBLite consensus disorder prediction 1029 1081 - -
Bva11g01509 1239 Gene3D - 572 767 IPR036890 -
Bva11g01509 1239 Gene3D - 1068 1237 - -
Bva11g01509 1239 MobiDBLite consensus disorder prediction 970 990 - -
Bva11g01509 1239 MobiDBLite consensus disorder prediction 1020 1081 - -
Bva11g01509 1239 SMART HKATPase_4 617 765 IPR003594 -
Bva11g01509 1239 PANTHER OSMOSENSOR HISTIDINE KINASE 19 1236 - -
Bva11g01509 1239 SMART HisKA_10 504 570 IPR003661 GO:0000155|GO:0007165
Bva11g01509 1239 CDD HisKA 505 566 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01509 Bva-Chr11 14375457 14381737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01509 12 1236 Histidine Kinase Gene Family AT2G17820 63.724 0.0 1563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva11g01509 HATPase_c 8.2e-23 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01509 - - gmx:100807543 1924.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00875 08 4491312 4498251 Bva11g01509 11 14375457 14381737 BWGD