Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01493 atgtccaGGGAAGtaaaggaagaggaagaacaTACACAAAGTGAGGAGCAGCATGCCAAGGATTACAGAGACCCTCCTCCAATAGCTATCTTGTACATGGGAGAGCTCAAGCAATGGTCCTTCTACAGGGCTCTGATAGCCGAGTTTGTAGCTACCCTTCTCTTCCTCTATGTTACTGTAGCCACTGTCATTGGCCACAAGAAGCAACTTGACCCCTGCGATGGGGTTGGCCTCCTTGGCATTGCTTGGTCCTTCGGTGGCATGATCTTCGTCCTTGTCTACTCCACTGCTGGAATATCTGGTGGTCATATAAACCCTGCCGTGACGTTGGGGCCACTTGTAACTAGAAAGGTGTCCCTGATTAGGGCGGTGGCCTACATGGTATCACAATGCTCGGGAGCTATTTGTGGCGTGGGTTA 419 0.4821 MSREVKEEEEHTQSEEQHAKDYRDPPPIAILYMGELKQWSFYRALIAEFVATLLFLYVTVATVIGHKKQLDPCDGVGLLGIAWSFGGMIFVLVYSTAGISGGHINPAVTLGPLVTRKVSLIRAVAYMVSQCSGAICGVG 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01493 139 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Bva11g01493 139 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva11g01493 139 PRINTS Major intrinsic protein family signature 122 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva11g01493 139 PRINTS Major intrinsic protein family signature 43 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva11g01493 139 Pfam Major intrinsic protein 35 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva11g01493 139 SUPERFAMILY Aquaporin-like 35 138 IPR023271 -
Bva11g01493 139 Gene3D Glycerol uptake facilitator protein. 29 139 IPR023271 -
Bva11g01493 139 MobiDBLite consensus disorder prediction 1 22 - -
Bva11g01493 139 PANTHER BNAC03G65520D PROTEIN 1 139 - -
Bva11g01493 139 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 139 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01493 Bva-Chr11 14310065 14310682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01493 1 139 Major Intrinsic Protein MIP AT4G35100 75.540 4.42e-73 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01493 K09872 - pop:7453650 211.075