Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01481 ATGGCGGACAATGGTTCTACTAAGGGGGTTACCTATCTTCATGGAGACTTGTACTTGAAAATCATCGAGGCTCGTAGATTGCCCAACATGGATGTTGTATCCGAGCATCTCCGCCGTTGTGTCACCGCCTGTGACACTATAAAGTTCTCTTCGTCCGACTCCGCTGCCGAAGCTGGTGGTGGGGACCGCAAAGTCCACCACCATAGCCGGATTATTACAAGCGACCCATACGTCACCGTTACGGTCCCACAAGCTACCGTTGCCCGTACACGTGTCAtaaaaaatgcacaaaatCCTCAATGGAACGAGCAGTTCAATATCCCACTGGCTCACCCGGTGGTTGATTTGGAATTCAATGTCAAAGATGATGATGTCTTTGGTGCTCAGTTGGTGGGAACTGCTAAAATTCCTGCCCAAAGGATTGCCTCCGGGGAGTTCATACGCGATTGGTTCCCAGTAATTGGGTCCTCCGGCAAGCCACCGAAGCGCGACACAGCAATTAGACTTGAAATGAAGTTCACGCCAGTTCAAGAAAACCCACTTTATTTGCACGGCATTGCCGGAGATCCTGAGCGTAAGGGTGTGAGACACGCTTACTTTCCAGTGCGAAAAGGAAGCTCCTTGAAATTGTACCAAGATGCCCATGTTCTGAATTTACCTGAAATTCCACTAGAAGGAAGAGAGGTTTATAAGCCTGGAACATGCTGGGAAGATATTTGTCACGCTATATCTGAGGCTCATCACATGATTTACATTGTGGGTTGGTCAGTCTTCCACAAGGTGAAGCTTATTAGGGAGCCTACGAGGGCATTGCCACGAGGTGGAGATTTGGCACTCGGAGAATTGCTCAAGTACAAGTCTGAAGAAGGGGTTCGGGTTCTGTTACTGGTTTGGGATGACAAGACTTCACACGATAAGCTCTTCGTGAAGTCGGGCGGAGTAATGCAGACACATGATGAAGAAACCAAgaagtttttcaaaaattcttCTGTGATGTGTGTTCTAGCCCCTCGGTATGCTAGCAGCAAGTTGAGCTTCATTAAGCAAAAGGTTGTCGGGACTGTCTTCACACATCATCAAAAATGTGTTATTGTGGACACACAAGGACCTGGTAATAACCGGAAGATAACTGCATTTTTAGGAGGCATTGATCTATGTGACGGCCGCTATGACACACCTGAGCATCGTCTTCTTCGTGACCTTGATACTGTATTTTCAGACGATTTTCACCAGCCCACAATTGGTGCTGGAACAAGGGCCCCAAGGCAACCATGGCATGATTTGCACTGCAGAATAGATGGACCTGCCGCTTATGATGTTCTTCTAAATTTTGAGCAGCGTTGGAGAAAAGCAACAAAGTGGAAAGAGTTTTCAGCACTCTTCAAAAAGGCTTCTCATTGGCACGATGATGCTTTACTGAAAATAGAACGCATCTCCTGGATATTAAGTCCTTCCCTTCCCTCAAAGAACGTTTCCAAAGTCACAATTGTTCCCCAGGATGACCCTCTGGTATGGGTTTCCAGCGAAGAAGATCCTGAAAACTGGCATGTTCAGATTTTCCGCTCCATTGACTCAGGATCTGTGAAAGGGTTTCCCAAAAATGTTGATGTTGCTAAGTCCCAGAATCTTACCAGTTCAAAAAATTTGGTGATAGATAATAGCATTCAAACGGCATATATCCAGGCAATTAGATCTGctcaacattttatttatattgagaaccaatattttcttggttcctCGTATGCATGGCCATCATATAAAAATGCAGGCGCTGACAATCTTATTCCAATGGAGTTGGCACTGAAAATTGCTGATAAAATCAAAGCTGGGGAGAGATTTGCTGTGTATGTTGTTTTACCGATGTGGCCAGAGGGTGACCCCAATTCTGCAACTATGCAAGAAATTCTCTTCTGGCAGGGCCAGACAATGCAAATGATGTATGGTGTCGTTGCTAGGCAATTGAACTCAATGGAACTTAGTGATTTGCATCCTCAAGATTACCTCAACTTCTACTGCCTTGGTAACCGAGAAGAAGTTCATGAAGAAACCTCCAGTACAAATGGTGCTCCGGTCTCAGAGTCGTACAAGCATGGTCGCTTTATGATATACGTGCATGCTAAGGGGATGATAGTCGATGATGAATATGTTATAGTGGGATCTGCTAATATTAATCAAAGGTCTATGGCTGGCTCAAAAGATACCGAGATTGCCATGGGTGCATACCAACCGCATTATTCTTGGTCAGCAAGGAAAAGACATCCACGTGGTCAGATTTATGGTTACAGAATGTCACTATGGAGAGAGCATCTCGGGAAGTTAGACAATACCTTTGAGGAAGCTGAGAGTTTGGAATGTGTGCGTAAAGTGAATGCAATCGCTGAagataatttgagaaaatatgcTTCTGAGGACTTTTTACCGCTGCAGGGACACATTCTTAAGTATCCTATACAGGTTGGTGCTGATGGGACGGTAAGCCCCCTACCTGGGCATGAGAATTTCCTGGACATTGGTGGTAAAGTGCTGGGGATTCATTCAACAGCAATTCCAGATATCCTTACAACATA 2570 0.4397 MADNGSTKGVTYLHGDLYLKIIEARRLPNMDVVSEHLRRCVTACDTIKFSSSDSAAEAGGGDRKVHHHSRIITSDPYVTVTVPQATVARTRVIKNAQNPQWNEQFNIPLAHPVVDLEFNVKDDDVFGAQLVGTAKIPAQRIASGEFIRDWFPVIGSSGKPPKRDTAIRLEMKFTPVQENPLYLHGIAGDPERKGVRHAYFPVRKGSSLKLYQDAHVLNLPEIPLEGREVYKPGTCWEDICHAISEAHHMIYIVGWSVFHKVKLIREPTRALPRGGDLALGELLKYKSEEGVRVLLLVWDDKTSHDKLFVKSGGVMQTHDEETKKFFKNSSVMCVLAPRYASSKLSFIKQKVVGTVFTHHQKCVIVDTQGPGNNRKITAFLGGIDLCDGRYDTPEHRLLRDLDTVFSDDFHQPTIGAGTRAPRQPWHDLHCRIDGPAAYDVLLNFEQRWRKATKWKEFSALFKKASHWHDDALLKIERISWILSPSLPSKNVSKVTIVPQDDPLVWVSSEEDPENWHVQIFRSIDSGSVKGFPKNVDVAKSQNLTSSKNLVIDNSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIADKIKAGERFAVYVVLPMWPEGDPNSATMQEILFWQGQTMQMMYGVVARQLNSMELSDLHPQDYLNFYCLGNREEVHEETSSTNGAPVSESYKHGRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGSKDTEIAMGAYQPHYSWSARKRHPRGQIYGYRMSLWREHLGKLDNTFEEAESLECVRKVNAIAEDNLRKYASEDFLPLQGHILKYPIQVGADGTVSPLPGHENFLDIGGKVLGIHSTAIPDILTT 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01481 856 PANTHER PHOSPHOLIPASE D 9 856 IPR015679 -
Bva11g01481 856 SMART pld_4 354 389 IPR001736 GO:0003824
Bva11g01481 856 SMART pld_4 701 728 IPR001736 GO:0003824
Bva11g01481 856 SUPERFAMILY Phospholipase D/nuclease 552 776 - -
Bva11g01481 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 354 389 IPR001736 GO:0003824
Bva11g01481 856 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
Bva11g01481 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 701 728 IPR001736 GO:0003824
Bva11g01481 856 SUPERFAMILY Phospholipase D/nuclease 235 461 - -
Bva11g01481 856 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 176 IPR035892 -
Bva11g01481 856 Pfam Phospholipase D C terminal 775 844 IPR024632 -
Bva11g01481 856 Pfam PLD-like domain 560 738 IPR025202 -
Bva11g01481 856 Pfam C2 domain 15 153 IPR000008 -
Bva11g01481 856 PIRSF PLD_plant 1 856 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bva11g01481 856 Gene3D Endonuclease Chain A 518 749 - -
Bva11g01481 856 Gene3D Endonuclease Chain A 225 473 - -
Bva11g01481 856 PANTHER PHOSPHOLIPASE D DELTA 9 856 - -
Bva11g01481 856 Pfam Phospholipase D Active site motif 354 389 IPR001736 GO:0003824
Bva11g01481 856 Gene3D C2 domain 13 185 IPR035892 -
Bva11g01481 856 CDD C2_plant_PLD 9 174 - -
Bva11g01481 856 SMART C2_3c 16 150 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01481 Bva-Chr11 14259388 14264588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01481 7 692 Phospholipase D Gene Family (Wang group) AT4G35790 69.075 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01481 K01115 - gmx:100814486 1389.4