Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01474 ATGGGTGTATCACAGAAATGGTTTAAATTTGTTCGTGGGAAGTTCCTCAAATCATCATCCAACAGAGATATCATTCTTCCTCGTAAAAGTGCTTGTTCAGATAGCTCAAATCATAGTGAAGAATCGATACTTAGGAATGAAACATTCTCTTTCCAAGATTTGTCCTCTGTGGAAGTTTTGACCAAGGAAGATATTGCGGCAATAAAAATCCAAGCTCATTTCAGGGGTCATCTTGCAAGGCGGGCATATCGAGCTCTTAGAAGCCTGGTGAAGCTGCAAGCATTGGCTCGCGGGGTATACGTAAGGAACCAAGTGAGGATAGCGTTGGATTGTATGCGCGCACTTGTCCGCTTACAAGTCAGGGTTCGTGCAAGGCAGCTTCTCGGCGCGTGCAATCACGATTCACGAGTAATGTA 416 0.4471 MGVSQKWFKFVRGKFLKSSSNRDIILPRKSACSDSSNHSEESILRNETFSFQDLSSVEVLTKEDIAAIKIQAHFRGHLARRAYRALRSLVKLQALARGVYVRNQVRIALDCMRALVRLQVRVRARQLLGACNHDSRVM 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01474 138 ProSiteProfiles IQ motif profile. 63 91 IPR000048 GO:0005515
Bva11g01474 138 Gene3D - 60 114 - -
Bva11g01474 138 Pfam IQ calmodulin-binding motif 66 84 IPR000048 GO:0005515
Bva11g01474 138 PANTHER OS04G0561100 PROTEIN 3 130 - -
Bva11g01474 138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 106 IPR027417 -
Bva11g01474 138 ProSiteProfiles IQ motif profile. 87 114 IPR000048 GO:0005515
Bva11g01474 138 SMART iq_5 62 84 IPR000048 GO:0005515
Bva11g01474 138 SMART iq_5 85 106 IPR000048 GO:0005515
Bva11g01474 138 PANTHER IQ-DOMAIN 5-RELATED 3 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01474 Bva-Chr11 14227971 14229012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01474 1 128 IQD Protein Family AT3G51380 51.562 2.94e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01474 - - ccaj:109793784 144.821