Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01468 ATGAGTTCCCGTTTAGGAGCTGAATTAAGCAAAATGACCGTTGATATGCCACCATCCATGGCCCAAAATGTGAGGCCAAGCAGGTCTTCCTTTAGCTCTAGCAATGGCCATGAAGAAACTCCTGTACACAGTTATGCTGCTGTTAGCAACGGTGATGACTATGACAGTGATGGCTCCAATTTTGCACCACCCACACCGAACACTCTATCAATGGCTATTCCAGCAGAACTGGCCGGCGCTGTACCCTTGATTGATAGATTCCAGGTGGAAGGATTCCTAAGATCAATGCAGAAGCAAATTCAATCTGCTGGGAAACGtggatttttttctaaaagatcTGTAGGTCCTCAAGCTCGAGAGAAGTTTACATTTGAGGACATGCTTTGTTTTCAAAAGGATCCAATACCAACATCATTGCTAAAGATTAATGGCGATTTGGTAAGCCGGgcaacaaaaatatttcagataattttgaaatatatggGAGTTGATTCATCTGATCGGATAACTCCAATAAGCTTAGATGAGCGGATTGAGCTTGTAGGAAAACTATACAAGCAAAGCTTGAAACGTTCTGAGCTTCGAGATGAACTTTTTGTTCAGATATCAAAGCAAACTAGAAATAACCCTGAGAGGCAATACTTGATAAAAGCATGGGAGCTAATGTATCTATGTGCATCCTCTATGCCTCCTAGTAAGGACATTGGTGGATACTTATCAGAGTATGTTCATAATGTAGCACATGGTGTGACTTCTGATTCTGAGATCCGAGCCCTTGCATtaaacacattaaatgctttgaaaCGCTCTGTCAAGGCTGGTCCAAGGCATACAATACCAGTTCGTGAGGAGATTGAAGCTTTGTTAACGGGGAGAAGGCTTACAACTATAGTGTTTTTCCTAGATGaaacttttgaagaaattacaTATGACATGGCAACAACAGTTGCTGATGCCGTTGAGGAACTTGCTGGGATCATTAAGCTGTCAACATACTCTAGCTTTAGTCTCTTTGAATGTCTCAAAGTTGTTACTGGCTCCAAATCACCTGACCCTGGGAATGAGGAATACATCGGGTTAGAtgataacaaatatattggAGATCTCCTAGCTGAATTTAAGGCAGCAAAAGATCGAAGTAAGGGAGAACTCTTGCACTGTAAACTCATACTCAAGAAAAAGCTTTTTCGTGAGTCAGATGAAGCTGTCACAGATCCAATGTTTGTCCAGTTGTCCTATGTACAAtTGCAACATGATTATATTTTGGGTAATTATCCTGTTGGAAGGGACGATGCTGCACAATTATCTGCATTGCAAATCCTTGCTGAGATTGGATTTGTTAACACGCCTGAATCATGCACTGACTGGAACTCCCTTCTAGAGCGCTTCTTACCAAGACAAATTGCAATCACGCGAGCAAAACGTGAATGGGAGTTGGACATTCTTTCTCGTTATCATTCATTGGAACATATGGCAAAAGATGACGCAAGACAACAATTTTTGCGGATATTGAGAGCACTTCCATATGGGAATTCTGTTTTCTTCAATGTTCGCAAGATTGACGATCCCATTGGGCTTCTGCCTGGAAGAATAATATTGGGCATTAACAAGAGAGGGGTTCATTTTTTCCGCCCAGTTCCAAAGGAATATCTTCATTCAGCTGAGTTAAGAGACATAATGCAATTCGGGAGTAGCAATACTGCAGTTTTTTTCAAAATGCGAGTTGCAGGTGTTCTTCACATATTCCAATTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACATATAAATGATGTAATGTTGCGACGCTATTCCAAAGCAAGAACTGTCGCTAGTGGTTCTGTGAATGGAGATATTTCTAACAGTCCTAAGCCTCCTAATATGGAACTATATGAGAGGCGGGTTCAGGATTTATCAAAAGCTGTTCAAGATTCTCAAAGATATGCTGATCAATTGGTGGAAGAATTGCGTGAAAAGCAAAAACTAGAAGAGAAAATGCAAGAAGAATTGGACGGCCTTAGAGAATGCTTAGAAGCTAATAAGCAAAATCTTGAAGAAGTTTTATCTGATTGTGATAGGCTTAAATCATTATGCAATGAAAAAGATAAGGCATTTCAGGCTGCAATTCTAGATAAAAGGAATATGGAAGCAAGATTGGCAAAGTTGAGCAGTCTAATGGTGGAAAACAATGCTAAAAAGGATCCTGTTGGAGTAAATGATAAAGTGTTACAAAAGCTTGAAGATGAGCTAAAACTACGTAAAGAAGAGCTGCATGCCGCTGAAGAAACTATCAAAAGACTAACCAATGAAAAATTGGTTTTGGAACAGAAGATATCAGAgctagagaagaagaaagctgaTGAGATTAGTGTTCTTGAACGGAAATTTGAGCAAGAACGCAAAGCCATGAGGTCTCAAGTTTATGACTTTGAAAAGAAGCTTGAAGGGGTTAGACAAGAATTAGTTGTTGCTGAGTCAACTCTTTCAGCCAAAGACTCTGAGATGGCTGATATGCAGAATAGTTTAAAGGAATTAGAAGAATTAAGGGAAATGAAAGAGGACATAGACAGAAAGAATGAACAAACAGCTGCCATATTGAAGATGCAAGCAGCTCAGTTAGCTGAATTGGAAGTCCTTTATAAGGAAGAACAAGTTCTAAGGAAGCgttattttaatacaatagAAGatATGAAAGGCAAGATTAGAGTTTACTGTCGGCTAAGACCTCTTGgtgagaaagaaattattgagaAAGAACGAGATGTCGTGTCAAGTATAGATGAGTTTACAGTTGAACATCTGTGGAGAGATGATAAGCCAAAGCAGCACATTTACGATCGTGTATTTAATGGTGAAGCTACCCAAGAAGAAGTATTTGAGGATACGAGGTATTTGGTGCAATCTGCGGTTGATGGTTATAATGTCTGCATATTTGCCTATGGTCAAACTGGTTCTGGAAAGACATTTACCATCTATGGATCTGAAAACAATTCAGGTCTTACACCACGTGCTACTGCAgaactatttaaaattttaaggagaGATGctcacaaattttctttttccttaaagGCATACATGGTGGAACTTTATCAAGATACCCTTGTCGATCTTCTTTTGCCAAAGAATGCAAAGCGTCTAAAATTGGACATCAAGAAGGATTCAAAGGGCATGGTAACCGTGGAAAACGTAACAGTTTTGTCAATTTCTACCATGGAGGAATTGAATAACATAATACAAAGAGGATCTGAACAACGACATACATCTGGAACACAGATGAATGATGAAAGTTCAAGATCTCATCTTATACTTTCAATTATAATTGAAAGTATCAACCTTCAAAGTCAATCAGTTGCAAGAGGGAAGCTAAGCTTTGTGGATCTTGCTGGGTcagaaaggataaaaaaatctGGTTCCTCAGGTAATCAACTTAAAGAAGCTCAGAGTATCAACAAATCATTATCAGCGCTTGGAGATGTTATCAGTGCTTTGTCTTCTGGTGGACAGCACATACCTTATAGGAATCACAAGTTAACTATGCTAATGAGTGATTCACTTGGTGGCAATGCCAAAACTCTCATGTTTGTGAATGTGTCTCCAGCAGAATCAAACTTGGATGAGACATACAATTCTCTCATGTATGCATCACGAGTGCGATCCATTGTTAATGATCCAAGCAAGAATGTTTCGTCGAAAGAGGTTGCTCGGTTGAAGAAGTTGGTTGCATATTGGAAGGAACAAGCAGGAAGAAGGGCAGAGGATGAAGATTtggaagaaattcaagaagaACGGCCAACTAGAGAGAGGGGAGATGGACGCTATTCTATGTA 3842 0.3756 MSSRLGAELSKMTVDMPPSMAQNVRPSRSSFSSSNGHEETPVHSYAAVSNGDDYDSDGSNFAPPTPNTLSMAIPAELAGAVPLIDRFQVEGFLRSMQKQIQSAGKRGFFSKRSVGPQAREKFTFEDMLCFQKDPIPTSLLKINGDLVSRATKIFQIILKYMGVDSSDRITPISLDERIELVGKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMPPSKDIGGYLSEYVHNVAHGVTSDSEIRALALNTLNALKRSVKAGPRHTIPVREEIEALLTGRRLTTIVFFLDETFEEITYDMATTVADAVEELAGIIKLSTYSSFSLFECLKVVTGSKSPDPGNEEYIGLDDNKYIGDLLAEFKAAKDRSKGELLHCKLILKKKLFRESDEAVTDPMFVQLSYVQLQHDYILGNYPVGRDDAAQLSALQILAEIGFVNTPESCTDWNSLLERFLPRQIAITRAKREWELDILSRYHSLEHMAKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARTVASGSVNGDISNSPKPPNMELYERRVQDLSKAVQDSQRYADQLVEELREKQKLEEKMQEELDGLRECLEANKQNLEEVLSDCDRLKSLCNEKDKAFQAAILDKRNMEARLAKLSSLMVENNAKKDPVGVNDKVLQKLEDELKLRKEELHAAEETIKRLTNEKLVLEQKISELEKKKADEISVLERKFEQERKAMRSQVYDFEKKLEGVRQELVVAESTLSAKDSEMADMQNSLKELEELREMKEDIDRKNEQTAAILKMQAAQLAELEVLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLGEKEIIEKERDVVSSIDEFTVEHLWRDDKPKQHIYDRVFNGEATQEEVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNSGLTPRATAELFKILRRDAHKFSFSLKAYMVELYQDTLVDLLLPKNAKRLKLDIKKDSKGMVTVENVTVLSISTMEELNNIIQRGSEQRHTSGTQMNDESSRSHLILSIIIESINLQSQSVARGKLSFVDLAGSERIKKSGSSGNQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLMYASRVRSIVNDPSKNVSSKEVARLKKLVAYWKEQAGRRAEDEDLEEIQEERPTRERGDGRYSM 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01468 1280 Coils Coil 747 788 - -
Bva11g01468 1280 Gene3D Kinesin motor domain 844 1226 IPR036961 -
Bva11g01468 1280 ProSiteProfiles Kinesin motor domain profile. 904 1225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g01468 1280 Pfam Kinesin motor domain 910 1225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g01468 1280 MobiDBLite consensus disorder prediction 1 42 - -
Bva11g01468 1280 SUPERFAMILY PH domain-like 514 602 - -
Bva11g01468 1280 MobiDBLite consensus disorder prediction 16 40 - -
Bva11g01468 1280 Gene3D MyTH4 domain 110 291 IPR038185 -
Bva11g01468 1280 MobiDBLite consensus disorder prediction 1252 1280 - -
Bva11g01468 1280 CDD FERM_B-lobe 409 507 IPR019748 -
Bva11g01468 1280 CDD FERM_C_KCBP 511 617 - -
Bva11g01468 1280 ProSiteProfiles FERM domain profile. 294 608 IPR000299 GO:0005856
Bva11g01468 1280 PANTHER KINESIN-LIKE PROTEIN KLP-3 80 1256 - -
Bva11g01468 1280 ProSiteProfiles MyTH4 domain profile. 130 289 IPR000857 GO:0005856
Bva11g01468 1280 ProSitePatterns Kinesin motor domain signature. 1125 1136 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva11g01468 1280 SUPERFAMILY Prismane protein-like 846 921 IPR011254 GO:0003824|GO:0016491
Bva11g01468 1280 Coils Coil 649 701 - -
Bva11g01468 1280 SMART B41_5 290 514 IPR019749 -
Bva11g01468 1280 CDD KISc_C_terminal 902 1227 - -
Bva11g01468 1280 SMART kinesin_4 902 1233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g01468 1280 Gene3D - 293 397 - -
Bva11g01468 1280 Gene3D - 512 620 IPR011993 -
Bva11g01468 1280 SUPERFAMILY Second domain of FERM 392 509 IPR035963 -
Bva11g01468 1280 PRINTS Kinesin heavy chain signature 1175 1196 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g01468 1280 PRINTS Kinesin heavy chain signature 976 997 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g01468 1280 PRINTS Kinesin heavy chain signature 1095 1112 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g01468 1280 PRINTS Kinesin heavy chain signature 1126 1144 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g01468 1280 Pfam MyTH4 domain 183 287 IPR000857 GO:0005856
Bva11g01468 1280 Gene3D - 406 507 IPR014352 -
Bva11g01468 1280 Coils Coil 832 869 - -
Bva11g01468 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 904 1252 IPR027417 -
Bva11g01468 1280 Pfam FERM central domain 400 514 IPR019748 -
Bva11g01468 1280 Gene3D - 1228 1276 - -
Bva11g01468 1280 PANTHER KINESIN-LIKE PROTEIN 80 1256 - -
Bva11g01468 1280 SMART MyTH4_1 130 289 IPR000857 GO:0005856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01468 Bva-Chr11 14195664 14204152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01468 45 1275 Calmodulin-binding Proteins AT5G65930 74.355 0.0 1883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01468 - - qsu:112004606 2033.07