Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01463 ATGGAGTTTGAACCTCTGAGTCTGGGCAATGAGGTCATTGAATTTGATATGATCGGTATAGGGGATGATGCTGCCATTGACATTGAGCACCCtgttgaagatgatgatgatcttGTTGAGAATGCGAGTGTTGCTGGCAGTACTGTTCTCAGTGCCCCTATGGGACCTCACATCCCCGATGGGGAAACAATTCTTGAACCTTATCAAGGCATGGATTTTGAATCTGAAGAGGCTGCTAAGGCGTTCTATAATTCCTATGCACGGCGTATTGGCTTTAGTACGCGTGTGAGCATGTCTAGGCGCTCCAGGCGTGATGGCGCTATAATTCAGAGATCTTTTGTGTGTGCCAAGGAAGGTTTCCGCGTGGAGAAGGAGAAGCATCATGATGGTAGAGTGAAGAGACCCCGTGCTGAAACTCGAGTTGGGTGTAAGGCCATGATGGttgtgaaaattcaaaattctggAAGATGGATTGTTTCCGCATTTGTCAAGGATCATAACCATGAATTGGTTCCACCTGACAAGGTGCATTGCCTGCGTTCTCACCGCCATGTCTCAGGTCCTGCAAAGTCATTGATTGATACTTTGCAAGGTGCTGGAATAGGGCCCAGTGGAATTATGTCTGCACTTATCAAAGAATATGGTGGAATCAGTAATATTGGCTTCACTGAGCGTGACTGTAGAAATTATATGAGGAGTAGTAGGCAGAGGACTCTTGGAGGTGACACCCAAGTCCTCTTGGATTACTTGAGGAGCAAGCAAGTTGAGGATCCTTCATTTTTCTATGCTGTACAGGGTGATGAAGAACACTGCATGAGTAATATCTTTTGGGCTGATCCTAAGGCCAGGACTAATTACACTTATTTTGGTGACACTGTTACCCTTGACACCACATACAGGTCAAACCGCTATAGATTGCCCTTTGCACCTTTCACTGGAGTAAATCATCATGGACAGCCTGTATTATTTGGTTGTGCCCTCCTAATAAATGAATCTGAGGCATCTTTTATCTGGCTATTTAAGACCTGGCTTGAAGCAATGTCAAGTAAGCCCCCCATCTCAATTACTACAGATCATGATAGAGTGATTCGTGTAGCTATTAACCATGTCTTTCCGGACACACGTCACCGATTCTGCAAGTGGCACATTTTTAAAGAATGCCAAGAGAAGTTGTCTTATGTCCTATCTGACCATCCTAATTTCGAAGCCGAATTCCATAAATGTGTTAACCTGACGGAGTCCATTGAGGAGTTTGAGTCGTGTTGGTTGTCTCTAATAGATAGATATGACTTGAGGGAACATGAATGGTTGCAAGCAATATATGGTGATCGACGGCAGTGGGTTCCAGTGTATTTGAGGGACACATTTTTTGCAGAAATGTCAATAACACAACGAAGTGATAgcataaattcttattttgatgGATATGTCAATGCATCAACAACCCTACAACTTTTTGTTAAGCAGTATGAGAAGGCTTTGGAAAGCCGTTATGAGAAAGAAGTCAAGGCTGATTATGACACTATAAACACTGCTCCAGTTTTGAAGACTCCATCACCCATGGAGAAGCAAGCAGCTGGGCTATTCACAAGGAGACTGTTTATGAAATTTCAAGAAGAGTTGGTTGTGACATTAACTTTCTTGGCATCCATAgtagaagaagaggaaatggTTACCGTGTACAGAGTAGAAAAGTATGGGGAAAGTCATAGGGCCTACTTGGTCAGATTTAACATTTTTGAGATGAAAGCAACTTGTAGTTGCCAGATGTTTGAGTTTTCTGGCCTACTTTGTAGACATATATTAACTGTTTTTAGGGTGACAAATGTTCTTACTTTACCATCTCATTATATTCTAAAAAGGTGGACTAGGAATGCCAAAAGTGGTGTCGTTTTGGATGAGCATAACAGTGGTTTGTTATATGGTGCACGAGAATCTCTTACTGTCCGATACAATAATCTTCGTCATGAGGCCCTTAAGTATGTTGATGAGGGAGTGACTTCCCCAGAAGTTTACAACGTGGCTATGAGCGCTCTTCAAGATGCTGCCAATAAGTTGGCTTTTGCAAAAAAGAATAGTGGAAGTGTTGGTATTTCAAATGGGACATGCAAAGCAGAGTTATATCAGAAAAGTGAAGCTAATAAAAATTGTACCAGTCACCAATGTGGTTTGGAGCAATCTTCATCTAAGGATGATATGGACCGAACGATTGAGAAGTTGACTCGCCAGCTAGATCGTTCTAAAAGGAAGTGTGAAGTTTACAGGTCTAGCTTGCTGTCAGTTTTGAAAGATATTGAGGAGCAGAAGCTACAACTATCAGTTAAAGTTCAAAATATCAAGTTAGGGATGAAAGATTG 2357 0.4081 MEFEPLSLGNEVIEFDMIGIGDDAAIDIEHPVEDDDDLVENASVAGSTVLSAPMGPHIPDGETILEPYQGMDFESEEAAKAFYNSYARRIGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVEKEKHHDGRVKRPRAETRVGCKAMMVVKIQNSGRWIVSAFVKDHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQGAGIGPSGIMSALIKEYGGISNIGFTERDCRNYMRSSRQRTLGGDTQVLLDYLRSKQVEDPSFFYAVQGDEEHCMSNIFWADPKARTNYTYFGDTVTLDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCALLINESEASFIWLFKTWLEAMSSKPPISITTDHDRVIRVAINHVFPDTRHRFCKWHIFKECQEKLSYVLSDHPNFEAEFHKCVNLTESIEEFESCWLSLIDRYDLREHEWLQAIYGDRRQWVPVYLRDTFFAEMSITQRSDSINSYFDGYVNASTTLQLFVKQYEKALESRYEKEVKADYDTINTAPVLKTPSPMEKQAAGLFTRRLFMKFQEELVVTLTFLASIVEEEEMVTVYRVEKYGESHRAYLVRFNIFEMKATCSCQMFEFSGLLCRHILTVFRVTNVLTLPSHYILKRWTRNAKSGVVLDEHNSGLLYGARESLTVRYNNLRHEALKYVDEGVTSPEVYNVAMSALQDAANKLAFAKKNSGSVGISNGTCKAELYQKSEANKNCTSHQCGLEQSSSKDDMDRTIEKLTRQLDRSKRKCEVYRSSLLSVLKDIEEQKLQLSVKVQNIKLGMKD 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01463 785 Coils Coil 730 757 - -
Bva11g01463 785 Pfam SWIM zinc finger 581 607 IPR007527 GO:0008270
Bva11g01463 785 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 42 759 - -
Bva11g01463 785 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 759 IPR031052 GO:0006355
Bva11g01463 785 Pfam MULE transposase domain 293 385 IPR018289 -
Bva11g01463 785 ProSiteProfiles Zinc finger SWIM-type profile. 573 609 IPR007527 GO:0008270
Bva11g01463 785 SMART 26again6 584 611 IPR006564 GO:0008270
Bva11g01463 785 Pfam FAR1 DNA-binding domain 82 172 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01463 Bva-Chr11 14170937 14175570 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva11g01463 MULE 4.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01463 - - gmx:100782414 1315.44