Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01454 atggagaatcCTCAAGACAACAATGGTCCCCAAGAGAATCAACTTACGATTGCTCCTCCTAATGGTATCCCTTCTCCTAGTCGCACTGGAAGAGGTAGCAGCAGTGGCAATTCTGAATTCACATGGAGTGGAATTCAATTTTCCGCTCTCAAGGTCAATGCTGGAGAGGATATTGCTGGaaaaattatgtcattttGTCAAGCTGGTCCAAGAGACGTTTGTATTCTGGCTGGATGTGGGGCTGTATCCCACGTCACAGTGCAGCAGCCTTTGGCATCTGAGCTTGAAACTTTGGAGGGACTTTTTTGGATTCTGTCTCTGTCGGGTTTGTTTGTGGTGCCAAAAAGAGATGATCCAACGAGCAGAATGGGTTGCATTACTATCTCATTGTGTGGCCCAGATGGTCGTGTTGTGGGAGGACGCATTGCTGGGACCGTAACTGCTGCAATGCCAGTTCTGatatatgcaTACTTTCCAGATTCTTGTGGGGATTCTCAATGCTA 503 0.4493 MENPQDNNGPQENQLTIAPPNGIPSPSRTGRGSSSGNSEFTWSGIQFSALKVNAGEDIAGKIMSFCQAGPRDVCILAGCGAVSHVTVQQPLASELETLEGLFWILSLSGLFVVPKRDDPTSRMGCITISLCGPDGRVVGGRIAGTVTAAMPVLIYAYFPDSCGDSQC 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01454 167 ProSiteProfiles PPC domain profile profile. 41 167 IPR005175 -
Bva11g01454 167 SUPERFAMILY AF0104/ALDC/Ptd012-like 44 157 - -
Bva11g01454 167 Gene3D - 46 160 - -
Bva11g01454 167 MobiDBLite consensus disorder prediction 1 37 - -
Bva11g01454 167 CDD DUF296 49 148 IPR005175 -
Bva11g01454 167 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 24 153 IPR039605 GO:0003680
Bva11g01454 167 Pfam Plants and Prokaryotes Conserved (PCC) domain 49 156 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01454 Bva-Chr11 14129216 14131250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01454 50 154 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 49.057 3.85e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01454 - - ats:109781070 115.931