Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01449 ATGACTCGCACACTTAGGATTCTCAAAACCGTAGAAAACGCTACGGTTGCAGCTCCACCGCCGGAAGCCGTTGCTTTGGAATCGGACTTCGTGGTGATTCTAGCTGCTCTGCTCTGCGCTCTCATATGCGTGGTGGGTCTAATCGCCGTCGCACGTTGCGCGTGGCTCCGACGCGGCGCCGTCCCAGGTGCTTCCCCGAGACAAGCTCTGGCCAACAAGGGGCTGAAGAAGAAGGTGCTCCAATCGTTACCTAAATTCACTTACATCGATAGCAGTTCGAGCAAATGGGTGGCTACGTTGGAGTGTGCGATTTGCTTGTCGGAGTTCGCCGAAGGCGACGAGATCCGGGTGCTGCCTCAGTGTGGCCACGGGTTCCACGTGAATTGCATAGATACATGGCTTGGTTCCCATTCTTCGTGCCCTTCCTGTCGGCAGATTCTGGTGGCAAGGTGCCAGAAGTGCGGCCAGTATCCGGCGGTTGGCGGCGGAGCTACCAAGATTTCTGTTACGGAAACAGAATTGAAATCCGGCGAAGAGCACAATGCTGCTGCCAGTACTAGTGGTAATGTTAGTAACGGTGTTACGGCTAGCGTCGATGATCGCTCTCACGGTGTAAATAGTGGTTTCTTGCCTTA 635 0.5465 MTRTLRILKTVENATVAAPPPEAVALESDFVVILAALLCALICVVGLIAVARCAWLRRGAVPGASPRQALANKGLKKKVLQSLPKFTYIDSSSSKWVATLECAICLSEFAEGDEIRVLPQCGHGFHVNCIDTWLGSHSSCPSCRQILVARCQKCGQYPAVGGGATKISVTETELKSGEEHNAAASTSGNVSNGVTASVDDRSHGVNSGFLP 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01449 211 Pfam Ring finger domain 101 144 IPR001841 -
Bva11g01449 211 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Bva11g01449 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 148 IPR013083 -
Bva11g01449 211 MobiDBLite consensus disorder prediction 179 202 - -
Bva11g01449 211 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 185 - -
Bva11g01449 211 SMART ring_2 102 143 IPR001841 -
Bva11g01449 211 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 185 - -
Bva11g01449 211 CDD RING-H2_PA-TM-RING 101 144 - -
Bva11g01449 211 MobiDBLite consensus disorder prediction 172 211 - -
Bva11g01449 211 SUPERFAMILY RING/U-box 81 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01449 Bva-Chr11 14108846 14109707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01449 1 154 C3H Transcription Factor Family AT1G20823 64.072 4.48e-60 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01449 - - gmx:100787383 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00973 08 4952116 4953133 Bva11g01449 11 14108846 14109707 BWGD