Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01444 ATGAAATACCGGTTTCTTTTGGTTTCAAGCGCTTTAATATTGCTAATCGCCCTGTTTGCGAGCTTAAATGGGGATGTATCGAAGTCAGAGAACTCCCCAGCCTCGCTTCCGCTTCTGGATTCTCATGGGAATGACTACACGGGCTTATCTCGGCATCCTCCAAGCCGTCCAAGGAGAAGTCTTCTGTCCCTGCCACCTAAGCGTGATACCGCACTCATTGTTGCTCTAGATGGGACAATGTATTTGGTGGAGAGTGGCTCCATGAGAGTAATATGGTCATTTGAAACAGGATCGCCCATCTACAGTTCATATCAAGCTCCTGTCAACAAGGATAACgataaagaaaatgtttctgGACTAAGTACTGAGTTTCTGGAATGTGGAGATGACTGGGGGTTATATGTTCAGACCACACACTTTGGCAAAATGAGACTCTCAACATCAATTGCAGATTTTGTACGAGCGACACCTACCATATCAGATGATGGAGCAGTTACACTTGGATCCAAAAGAAGCACTGTGTTTGACATTGATGCCAAGATTGGAAGGATCATTCGAAGCTATGCTATATCGGATTTTGATAATTCTTCAGCATGGTGGAGTGATGAAAAGCAGAGTGTTATGGATATTCCTAGTAGAAAGAATCAGGATCTGGTGAAGGCTGATGGTGTAGAGCTAAATACACCAGAGCTGCTACTGAAAATATTTAGGACAGATTATTCTCTGCAATCTGTTGGTCAATCAGAGAAGGTTCTATGGACTATGAAAGTAGCTGAATTTGAGGCTATATTGTATTGCCAACATAATGATCCATCTGGTCATTTATCTGATTCAGAGGATAATTATGCTACTGACATTGGCTTGGATTTTGCTATGCCATATCCAtgttttgagaaaaaagaagtctACCGTCTGCAAAAGAATTTCCTATTAGAATCTTCTAGCCCTGAAAGATTACCTGGGGCTAATCATGAAAAGGAAATGCTTCCAATGCCTCCTTCAAATCCAATGCTTCCTGGGCCTGTGGCTGCTCATGTGCCAAATTCTTTGCCTCCTCTGCCAGTAAATATGGGATTCTatgataataatgataatgcaGCTGCAATCCCTCAGCCTCCAGTGGAGATTAGTGAATCAGAGGAGGTTGATGAAAATAGGATAATAGAACGGTGGACAGCATTGCCTCTAGTAtcttttgtggtctttctatTGGGTTCATCAATATACCATTCTCTGATGGTTAAAGAGCAAACTACATTCAATGGCCGAAAGAGTGAATCTGATTTGAAAAGCGGACCTCctaagaaaaagagaacacGTAAATCAGGAAAGAGTGGTGGCAGTGTTGATAAGGAGGATAGGCTTCTGCCATCAGAAGATGAGGATGTATCGGCACGTGGTGAAACTGATAGGGAAGCATGgcttcaatttaataaagttgATGAAGGTGCTGATGGACGTAGGATTGGTAAACTATTAgtatcaaataaagaaattgctAAGGGAAGCAATGGCACAATTGTCCTAGAGGGAATGTACGAAGGCCGAAAAGTTGCTGTCAAACGTCTTGTGCTGGCTCATCATGATGCAGCCttcaaagaaattcaaaatctcaTTGCATCTGACTGTCATCCAAACATTGTCCGATGGTATGGGGTGGAACATGATCAAGATTTTGTTTACCTTGCTCTGGAGCGTTGTACTTGCAACTTAGATGATTTGATTCAGGTTTACTCTGATATATCAGAAAACTCAGTGTTCAGCAAGGACCAAACTTCCATATGCACATTGAAGGCACAGATTGAGATGGGGAGAGATAATATGCAAAATCTTTGGAAAGCGAATGGCTACCCATCGCCTCTATTGTTGAAGCTGATGAGGGATGTGGTTTCTGGGCTTGTTCATTTGCATGAATTAGGAATAATACATCGGGATTTGAAACCCcaaaatgttttaataatcAAAGAGAGAACCCTATGTGCAAAGCTTTCTGATATGGGCATCAGCAAACGCCTTTTTGGAGATATGTCCTCTTTAGGTCATAATGCCACTGGCTGTGGTAGTTCAGGTTGGCAAGCACCAGAACAGCTTGCTCTTGGACGCCAAACACGGGCTGTTGATTTGTTTAGCTTAGGTTGTGTCCTCTTTTTCTGCATTACTGGGGGAAGACATCCATTTGGAGAACGTCTTGAACGTGACgttaatattgtaaaaaatcaaaaggaccTTTTCTTAGTGGAGTTCCTTCCTGAAGCTGAGGATCTTATTTCTCGTTTATTAGAGCCTGATCCTGACCAAagGCCAAAGGCGTCCGAAGTATTGCAACATCCTTTTTTCTGGAGTTCAGAGATGAGACTTTCATTTCTTCGAGACGCCAGTGACAGGGTGGAACTAGAAGATAGGGAGACCGCTTCTGATATTCTGAAAGCATTAGAAAATATTGCGCCAGTAGCTTTAGGTACAAAATGGGACGAAAAGCTGGAAACAGCCTTCATTAATAACATTGGCCATTACAGAAGATACAAGTTCGACAGTGTCCGAGACTTGTTGCGAGTCATGAGAAACAAACTGAATCATTATAGAGAATTGCCTGAAGAAATTCAGGAGCTTGTTGGGCCTGTACCGGAAGGATTCAATGACTACTTTGCAAGTCGATTTCCGAGACTCTTGATAGAAGTATATAAAGTTATACGTAGATATTGCATGAGGGAGGAAAGTTTTCAAAGGTATTTTAATAACGTTGATTA 2747 0.3964 MKYRFLLVSSALILLIALFASLNGDVSKSENSPASLPLLDSHGNDYTGLSRHPPSRPRRSLLSLPPKRDTALIVALDGTMYLVESGSMRVIWSFETGSPIYSSYQAPVNKDNDKENVSGLSTEFLECGDDWGLYVQTTHFGKMRLSTSIADFVRATPTISDDGAVTLGSKRSTVFDIDAKIGRIIRSYAISDFDNSSAWWSDEKQSVMDIPSRKNQDLVKADGVELNTPELLLKIFRTDYSLQSVGQSEKVLWTMKVAEFEAILYCQHNDPSGHLSDSEDNYATDIGLDFAMPYPCFEKKEVYRLQKNFLLESSSPERLPGANHEKEMLPMPPSNPMLPGPVAAHVPNSLPPLPVNMGFYDNNDNAAAIPQPPVEISESEEVDENRIIERWTALPLVSFVVFLLGSSIYHSLMVKEQTTFNGRKSESDLKSGPPKKKRTRKSGKSGGSVDKEDRLLPSEDEDVSARGETDREAWLQFNKVDEGADGRRIGKLLVSNKEIAKGSNGTIVLEGMYEGRKVAVKRLVLAHHDAAFKEIQNLIASDCHPNIVRWYGVEHDQDFVYLALERCTCNLDDLIQVYSDISENSVFSKDQTSICTLKAQIEMGRDNMQNLWKANGYPSPLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLIIKERTLCAKLSDMGISKRLFGDMSSLGHNATGCGSSGWQAPEQLALGRQTRAVDLFSLGCVLFFCITGGRHPFGERLERDVNIVKNQKDLFLVEFLPEAEDLISRLLEPDPDQRPKASEVLQHPFFWSSEMRLSFLRDASDRVELEDRETASDILKALENIAPVALGTKWDEKLETAFINNIGHYRRYKFDSVRDLLRVMRNKLNHYRELPEEIQELVGPVPEGFNDYFASRFPRLLIEVYKVIRRYCMREESFQRYFNNVD 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01444 915 Gene3D Transferase(Phosphotransferase) domain 1 599 781 - -
Bva11g01444 915 ProSiteProfiles KEN domain profile. 782 913 IPR010513 GO:0004540|GO:0006397
Bva11g01444 915 MobiDBLite consensus disorder prediction 443 467 - -
Bva11g01444 915 CDD RNase_Ire1 783 911 - -
Bva11g01444 915 Pfam Protein kinase domain 496 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01444 915 Gene3D Phosphorylase Kinase; domain 1 480 565 - -
Bva11g01444 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Bva11g01444 915 SUPERFAMILY Protein kinase-like (PK-like) 496 796 IPR011009 -
Bva11g01444 915 PANTHER IRE1-RELATED 47 911 IPR045133 GO:0004521|GO:0004674|GO:0030968
Bva11g01444 915 SMART serkin_6 493 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01444 915 MobiDBLite consensus disorder prediction 419 467 - -
Bva11g01444 915 ProSiteProfiles Protein kinase domain profile. 493 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01444 915 SMART PGNneu 844 898 - -
Bva11g01444 915 Gene3D KEN domain 782 915 IPR038357 -
Bva11g01444 915 Pfam Ribonuclease 2-5A 785 911 IPR010513 GO:0004540|GO:0006397
Bva11g01444 915 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 47 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01444 Bva-Chr11 14074251 14080211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01444 499 778 MAP Kinase Kinase Kinase AT3G06030 25.676 7.21e-20 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Bva11g01444 Pkinase 5.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01444 K08852 - gmx:100788389 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00968 08 4914834 4919736 Bva11g01444 11 14074251 14080211 BWGD
Bva11g01444 11 14074251 14080211 Bva11g01444 11 14074251 14080211 ECH
Bva08g00968 08 4914834 4919736 Bva11g01444 11 14074251 14080211 ECH