Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01442 ATGAGCAAAGTTTGGCTTCTTGTGTTTGTGCTCTTCTACAATGGCTTTCTTTCACATGAAGTCACTGATGTTTCTACTAGACCCAGTAGTGTTAAAATTGGGGCCGTTTTATCTTTCGATTCGACCATAGGCAAAGTGGCAAAAGTTGCCATACAAGCTGCAGTCGATGATATAAATTCCAACCCATCGATTCTAAATGGAACTAAGCTTAACATTTCACTGAAGGACACAAAGTTCTCCAGTGGGTTCCTTGGAATCATTGATTCATTACTATTGTTGGAGAAAGACACCGTGGCCATAATTGGTCCCCAGTACTCAGTTATGGCTCATGTGATTTCACATATAGCAAATGAGCTGCAAATACCCTTACTGTCATTTGCTGCCACAGACCCTACACTGTCTCCCCTTCAGTTCCCATACTTTGTTAGGACAACACAGAGTGATCTGTTTCAAATGGCTGCTATTGCTGATATTATTAGCTATTATGAGTGGAGAAATGTAATAGCAGTCTTCATTGATGATGATCATGGAAGAAACGGAATAGCTGCATTAGGGGATAGGCTAGTTGATAAACGTTGTAAAATCTCACATAAAGCAACCCTTAAGCCTAATATCACAATAACCCGGGAAGAAATTAAGAGTGTATTATTGAAGGTGGCTTTAATGGAGTCTCGGGTTATAGTCCTTCACATAGATCCTGCTTTTGGTCTAGAAGTTCTTCGTGTGGCTAATGAACTTAGCATGGTAAATGGGTATGTGTGGATAACCACTGATTGGCTTCCTACTATACTAGATACAGATCCATCCAGGGCCACTTCACACTTGAATGACATTCAAGGTGTTATCACCTTGCGCATGTACACCCCAGATAATTCAGAAACTAAAAGGGATTTTGTTTCTAGGTGGAGCAATCTAACTAGTGAAAAAGCTGCTCACCAGGGTCCTTTTGGGTTGAACACCTATGGTCTATATGCCTATGACACTGTCTGGGTTCTTGCTTATGCActtaatgaatttttcaacAGTGGGGGAAAGTTGTCCTTTTCAAATGATTCaagtttaaacattttaagagGGGACAACCTACATTTGGATAAAGTATGGGTCTTTTCTAATGGGAATCTTCTGCTTAAGAAGATTTTAGAGGTCAATATAACAGGTGTGACAGGCAAATTGAGGTTTGGTTCAGATGGGAACCTTGTGGATCCTGCATATGAAGTCATTAATGTGATTGGCACTGACGTTAGAAGAATTGGTTATTGGTCCAATTCTTCTGGTTTATCAGTCAGTGAACCAGGTAAAGGTAAGACCCCCATGACTCCCCAATTATATGGTGTCATCTGGCCTGGCCGAAAAACTCAAACACCTAGAGGTTGGGTTTTTGCCAGCAATAATGGAAGGAATTTGAGAATCGGTGTCCCTCTGCGGATTAGTTACCACGAATTTGTGTCAAGAGTTGACGCTGACTTGTTTAGTGGTTATTGTATTGATGTGTTTACTGCTGCACATGACTTGTTGCCGTATGCTGTCCCATATAAGTTTATTCCATTTGGTGATGGTCGTACCAACCCAATGAACTCAGATCTTCTGAGCATGATTCCAACTGGTAAATTTGATGCTGTGGTGGGAGACATTACCATTACCACAAACAGATCAAAGATGGTGGACTTCACACAGCCATACATTGAGTCAGGACTAGTTGTAGTTGCTCCTATCAGGAAGTTGAATTCTAGTGCTTGGGCTTTCCTGAGACCATTTACTCCAACGATGTGGTTTGTGACAGGAAtgtttttccttgttttgggAGCTGTTGTGTGGATTTTAGAACGCAGGATGAATGATGACTTTAGAGGCCCAGCTAGAAGGCAGTTGATGACCATTATATGGTTTAGCATTTCAACCTTGTTCTTTGCTCATAGAGAAAGAACTATGAGCACCCTTGGTCGCTTGGTACTAATTATATGGCTGTTTGTGGTTCTGATACTCAACTCAAGCTATATTGCAAGTTTGACCTCTATGCTTACGGTGGAACAGCTCTCTTCCTCAGTGAAGGGAATTGAAAGCTTGGCAACAAGCAATGACCGCATTGGTTACCTGAGCGGATCATTTGCTGAAAATTATCTAACTGAGGAGCTCAACATACACAAGTCCAGGCTTGTTCCTCTGAACTCACCTTCAGAATATGAGAAGGCCTTAAAAGATGGACCTATTAATGGTGGTGTTGCTGCAATAATAGATGAACGTGCATACATGGAGCTCTTCCTGTCAACCAGGTGTGAATTTGGCATTGTTGGTCAAGAGTTCACCAAAATGGGATGGGGCTTTGCTTTCCCAAGGGACTCTCCCCTGGCCATTGACATGTCAACTGCCATACTAAAACTATCAGAGAATGGAGATCTCCAAAGAATTCATGACAAATGGCTCAAAAGAAGTGCTTGCATTGCGGGAGGTGCAAAGCAAGACAGACTAGAGCTTAAAAGCTTCTGGGGTCTGTTTCTTCTAAGTGGCATAGCGTGCGTTATTGCTCTTCTTTGTTACTTTATTCGGATGGTTTACCGTTTCAGCAGGTGTCCCACTGGTAACCTTGACTGCTCATCACGCTCAGCTCGTCTTCGCTCGTTCTTCTCCTTtgtcaatgaaaaagaagaggaagacaAGGACAgaccaaagaaaaggaaaaaggaaaggggCAGCAGCAGAAGAGTGGTGCATGAAGATGGGTCAAATATCATATA 2735 0.4066 MSKVWLLVFVLFYNGFLSHEVTDVSTRPSSVKIGAVLSFDSTIGKVAKVAIQAAVDDINSNPSILNGTKLNISLKDTKFSSGFLGIIDSLLLLEKDTVAIIGPQYSVMAHVISHIANELQIPLLSFAATDPTLSPLQFPYFVRTTQSDLFQMAAIADIISYYEWRNVIAVFIDDDHGRNGIAALGDRLVDKRCKISHKATLKPNITITREEIKSVLLKVALMESRVIVLHIDPAFGLEVLRVANELSMVNGYVWITTDWLPTILDTDPSRATSHLNDIQGVITLRMYTPDNSETKRDFVSRWSNLTSEKAAHQGPFGLNTYGLYAYDTVWVLAYALNEFFNSGGKLSFSNDSSLNILRGDNLHLDKVWVFSNGNLLLKKILEVNITGVTGKLRFGSDGNLVDPAYEVINVIGTDVRRIGYWSNSSGLSVSEPGKGKTPMTPQLYGVIWPGRKTQTPRGWVFASNNGRNLRIGVPLRISYHEFVSRVDADLFSGYCIDVFTAAHDLLPYAVPYKFIPFGDGRTNPMNSDLLSMIPTGKFDAVVGDITITTNRSKMVDFTQPYIESGLVVVAPIRKLNSSAWAFLRPFTPTMWFVTGMFFLVLGAVVWILERRMNDDFRGPARRQLMTIIWFSISTLFFAHRERTMSTLGRLVLIIWLFVVLILNSSYIASLTSMLTVEQLSSSVKGIESLATSNDRIGYLSGSFAENYLTEELNIHKSRLVPLNSPSEYEKALKDGPINGGVAAIIDERAYMELFLSTRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLKRSACIAGGAKQDRLELKSFWGLFLLSGIACVIALLCYFIRMVYRFSRCPTGNLDCSSRSARLRSFFSFVNEKEEEDKDRPKKRKKERGSSRRVVHEDGSNII 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01442 911 SUPERFAMILY Periplasmic binding protein-like II 446 810 - -
Bva11g01442 911 Gene3D - 723 815 - -
Bva11g01442 911 CDD GluR_Plant 469 808 - -
Bva11g01442 911 PIRSF IGluLR_plant 1 910 IPR017103 -
Bva11g01442 911 Gene3D - 579 717 - -
Bva11g01442 911 Gene3D - 49 402 - -
Bva11g01442 911 SMART GluR_14 470 810 IPR001320 GO:0015276|GO:0016020
Bva11g01442 911 Pfam Ligand-gated ion channel 810 839 IPR001320 GO:0015276|GO:0016020
Bva11g01442 911 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 325 337 - -
Bva11g01442 911 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 105 133 - -
Bva11g01442 911 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
Bva11g01442 911 PANTHER GLUTAMATE RECEPTOR 21 891 - -
Bva11g01442 911 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 21 891 - -
Bva11g01442 911 Gene3D - 464 578 - -
Bva11g01442 911 CDD PBP1_GABAb_receptor_plant 32 430 IPR044440 -
Bva11g01442 911 Gene3D - 147 427 - -
Bva11g01442 911 SUPERFAMILY Periplasmic binding protein-like I 27 459 IPR028082 -
Bva11g01442 911 MobiDBLite consensus disorder prediction 881 911 - -
Bva11g01442 911 Pfam Receptor family ligand binding region 49 412 IPR001828 -
Bva11g01442 911 Pfam Bacterial extracellular solute-binding proteins, family 3 484 809 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01442 Bva-Chr11 14063151 14066540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01442 5 900 Ion Channels AT3G51480 58.443 0.0 1063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01442 K05387 - gmx:100790502 1342.41