Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01441 ATGGCTGCGGTGAGTGATTGCTCGCCTCAGACAGCTACATTGACTTGTGGGTGCATTAAGGGCAATAATAGTTTTTCTTCTATGGAGGATCAAAATGGTGATACCGTGGGAAATTTAAATCAGAATATTGGGAAACCTCCAAGAGATCTTTCATCATCGCTCCATTGGAACAGCTCTTCATGGCTGACTGAAGCGGACTCACACATTAGGATCATTGGCCTGACGTCGCTGCCAGAAGAAAAATCAGAGTTTCGACCTGTATTTCGATCTGGAAGCTATTCTGATAAAGGACCAAAGCAGTACATGGAGGATGAGTACATCTGTGTTGATAATCTCGGTGAAAATGTTGGTCCAGGAACTAATTTCCCCTCCCCAGGGGCATTTTATGGGGTATTTGATGGACATGGTGGTACTGATGCAGCATCATTTACCAAAAAGAATATCCTTAAGTTAATCATTGAAGACTCCCATTTCCCGTGTGGCTTAAAGAAGGCTGTTAAGAGTGCGTTTGCGAAGGCTGATCATGCATTTGCAGATGCTAAAGCACTCGACAGTTCCTCAGGCACCACTGCCTTGACAGCCCTTATGTTGGGAAGGATGACTCTAATTGCCAATGCTGGGGATTCCCGTGCTGTATTGGGCAAACGGGGAAGAGCCATTGAACTTTCTAAAGACCATAAACCAAATTGCACTTCTGAAAAACTAAGAATTGAGAAACTAGGTGGTGTCATCTACGATGGCTACCTCAACGGCCAGCTATCAGTGGCAAGAGCTCTTGGGGACTGGCACATCAAGGGCTCTGAAGGTTCAAAAAGCCCTTTAAGCTCAGAGCCTGAGTTGGAGGAGATTCTTCTGacagaagaagatgaattttTGATACTGGGTTGTGATGGGTTATGGGATGTGATGAGCAGCCAGTGTGCTGTTACAATGGTGAGGAAGGAGCTGATGCAGCATAATGATCCAGAGAAGTGCTCAAAGGCACTTGTGAAGGAGGCACTCCAACGCAACTCGTGTGACAATCTCACAGTTGTTGTGATCTGTTTCTCTCAAGACCCACCTCCGAAAATACAAATTCCCAGAGCTCATAGGAGGAGGAGCATATCAGCTGAAGGCCTTGATCTTCTCAAAGGTTTCTTGAATGACATATG 1151 0.4492 MAAVSDCSPQTATLTCGCIKGNNSFSSMEDQNGDTVGNLNQNIGKPPRDLSSSLHWNSSSWLTEADSHIRIIGLTSLPEEKSEFRPVFRSGSYSDKGPKQYMEDEYICVDNLGENVGPGTNFPSPGAFYGVFDGHGGTDAASFTKKNILKLIIEDSHFPCGLKKAVKSAFAKADHAFADAKALDSSSGTTALTALMLGRMTLIANAGDSRAVLGKRGRAIELSKDHKPNCTSEKLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSEGSKSPLSSEPELEEILLTEEDEFLILGCDGLWDVMSSQCAVTMVRKELMQHNDPEKCSKALVKEALQRNSCDNLTVVVICFSQDPPPKIQIPRAHRRRSISAEGLDLLKGFLNDI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01441 383 PANTHER PROTEIN PHOSPHATASE 2C 6 371 IPR015655 GO:0004722|GO:0006470
Bva11g01441 383 Pfam Protein phosphatase 2C 96 341 IPR001932 -
Bva11g01441 383 Gene3D - 76 353 IPR036457 -
Bva11g01441 383 ProSiteProfiles PPM-type phosphatase domain profile. 89 349 IPR001932 -
Bva11g01441 383 CDD PP2Cc 88 349 IPR001932 -
Bva11g01441 383 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 6 371 - -
Bva11g01441 383 SUPERFAMILY PP2C-like 82 350 IPR036457 -
Bva11g01441 383 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
Bva11g01441 383 SMART PP2C_4 79 347 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01441 Bva-Chr11 14058452 14061043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01441 82 383 PP2C-type Phosphatase Gene Family AT3G51470 79.801 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01441 K14803 - zju:107424335 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01441 11 14058452 14061043 Bva11g01441 11 14058452 14061043 ECH
Bva08g00963 08 4890093 4893580 Bva11g01441 11 14058452 14061043 ECH