Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01435 ATGAAGAAACAGATCAACGAGGAGTTATCCAAACGATCAAACCCCAGACAGAATGCTCCAAGCGTTGTGGCAAGGTTGATGGGGATAGATATGATGCCTTTAGGCACTAAGTCTGTCATTTCGTCAGATGAAAGAAAAGGTGGAAATATGGGGAAGAAGTTTTTGAAGAAGGAAATGGATGGAAGGGCTTCAGTTGGTCATGGCTTTTCCAACTCAAATTCTTATAACCAGATAGAATTTGACTCGTTTTATCAAGACATAAATGATGATGGATGGGACCGAAGTTTTGGAAAACCAAGACCCCGGGAACATCCTCAGGAAGAGGaactacaaaaatttaagaaagagtTTGAAGCATATCAAGCAGCAAGGTTTATGGAGTGTTCAAAGGTTTTTGATCTTGGCAGTGTTTCTAGACAATTGCTTGCTCAAGAGAACCTGAACAAGGAAAAGATGGCACATTGTGCAAATAACCAAAGTGTGGCAATAGGGAAACCTGCAAAGCTTAACAGCCACTCATTTAACTCACTGATACATAATGGCGGTTATGCAGAATATCATGATGTTATGATGGAGTTCATCCCAGCTAAGCAAAGGGGATTCTTTTCTTCAAGAGGCAGAACGTTAAGTAGAGATTTTGAGGAGTCTTTATTGATGAAATCTAATAGCAGATTAGATAGATCATCTCCCACTCGGATAGTAATCTTGAAGCCAGGTCATCATAGATTTTGCATCCAAGAAGAGGATTGGAACAGCGCATCATGCCCTTCACAAAAGAGAAATAGTATAGAGGATTTTCTTGAGGAGGTGAGAGAGCGGCTGAAATGTGAACTACAACGGAAAAGTCTCAAAAAGGGTTCTGTGGTCAGAGGAAGTGGAATTGAGAGACCTTACAATGAAGAACCAGATCCTAAACAAATAGCTCGTCATATAGCAAAACAGGTCAGAGAAAATATGACTAGAGATGTTGGAACTAATTTACTCTgctcaaaatcaacaagatcCAACAGAAGTGAAATTCATttcaatggaccaagttcccCAGAATTTATGAACAGAGATACCAGCAGGTTCTTGTCCGAGAAGCTAAGAAATGTTCCAAAAAGTGAGTCACATCTTGACATTTCTGAAGTGGCTTGTGGGAACTCAAAGTCTCATGTGTTAGATAATCATAGGGTTAGCCTAAAACAAGCAGGGGATATCTTGAAGTGTGGAAATCACATGAGCCAATGggaaatttcaaaagaaggaaaagaaatgctAACAGGATCTTTCAGGCATGAACCAGATGATAATATCTTGCTTCACAGGGGCGCCCATATTCGGAGGAAGCTTGAACTTGAAGCCATTGAAACCGTGCCTGTTGATGTCAGAAAACGgaacaaaaaaagatttaatatcaaagaaaaagtttccaattttaaatatagtcTAGTTCTAAGACGGAAGCTTTTTGGCAAAAGGATTCAATCAATGGTAGAGTCACATGGCAACGAGTATGGTCCGATGGTAAGAGATGTCACTAGTGGACCAACAGTACTCTTGAACTGCGGTGAGAGGCTGGAGAACTCTACCGAGGTGCCCCCTAGTCCTGCATCTGTATGCAGCAGTGCTCAAGAAGAACGCTGGAGGCAAGCTGAATACTCAAGTCCAACATCAACTCCAGATGTATCTTCAAGAGACGATGATGTTGTGCCGCAATTTTTCAGAGATATCAGCTCTAATTTGAATGCGCTAAGGAAGCAACTGAATCAACTTGAGTCTGATGACCCTGATGACTTCTCAATCAAACAGGATACTGTTGAATCTGAACTAGTTCAACTAGAGGACCCAGCGGAATCTTACATGAGAGATCTACTTGTTGCTTCTGGTATATACTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCAAAGCCTATGGGGAACTCAGCTTTTGAAGAAGTGGAAGAATCTCATAGGAAATCAGCCAAAGAGGATGAAGGTTCTATAAAGGATCAGGAGAAGCATAAGTTAGAGCACaagatattatttgatttgttaaatgaGGCACTTTCCATTGTTCTTGGACCACCAGTGGCAGTGTCTAGATTCAGAAGGAAACTAAGCAATTCCTTCGTGCTGCCAAAACCAAGTGGAAAGGAACTGCTGAAGTTAGCATGGGACATAATCCGGGTTTCTTTGTATCCTCCATTTGACACATGTTCTAGTTCTCTTGATAATTTGGTGGCTCGAGATCTGGGATCCATTCCCTGGTCTGCATTGATAAGTGACGAGATTACTGTACTGGAAAGAGAGATAGAATGCCTAATTGCTGAAGATCTGGTTAAAGAACTCACAGAAGATATGTTGTA 2363 0.3881 MKKQINEELSKRSNPRQNAPSVVARLMGIDMMPLGTKSVISSDERKGGNMGKKFLKKEMDGRASVGHGFSNSNSYNQIEFDSFYQDINDDGWDRSFGKPRPREHPQEEELQKFKKEFEAYQAARFMECSKVFDLGSVSRQLLAQENLNKEKMAHCANNQSVAIGKPAKLNSHSFNSLIHNGGYAEYHDVMMEFIPAKQRGFFSSRGRTLSRDFEESLLMKSNSRLDRSSPTRIVILKPGHHRFCIQEEDWNSASCPSQKRNSIEDFLEEVRERLKCELQRKSLKKGSVVRGSGIERPYNEEPDPKQIARHIAKQVRENMTRDVGTNLLCSKSTRSNRSEIHFNGPSSPEFMNRDTSRFLSEKLRNVPKSESHLDISEVACGNSKSHVLDNHRVSLKQAGDILKCGNHMSQWEISKEGKEMLTGSFRHEPDDNILLHRGAHIRRKLELEAIETVPVDVRKRNKKRFNIKEKVSNFKYSLVLRRKLFGKRIQSMVESHGNEYGPMVRDVTSGPTVLLNCGERLENSTEVPPSPASVCSSAQEERWRQAEYSSPTSTPDVSSRDDDVVPQFFRDISSNLNALRKQLNQLESDDPDDFSIKQDTVESELVQLEDPAESYMRDLLVASGIYFGSWDKSLLRGDTFAKPMGNSAFEEVEESHRKSAKEDEGSIKDQEKHKLEHKILFDLLNEALSIVLGPPVAVSRFRRKLSNSFVLPKPSGKELLKLAWDIIRVSLYPPFDTCSSSLDNLVARDLGSIPWSALISDEITVLEREIECLIAEDLVKELTEDML 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01435 787 Pfam Domain of unknown function (DUF4378) 614 781 IPR025486 -
Bva11g01435 787 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 437 - -
Bva11g01435 787 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 434 786 - -
Bva11g01435 787 MobiDBLite consensus disorder prediction 1 21 - -
Bva11g01435 787 Coils Coil 569 589 - -
Bva11g01435 787 Pfam DUF761-associated sequence motif 17 33 IPR032795 -
Bva11g01435 787 MobiDBLite consensus disorder prediction 522 562 - -
Bva11g01435 787 MobiDBLite consensus disorder prediction 526 560 - -
Bva11g01435 787 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 437 - -
Bva11g01435 787 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 434 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01435 Bva-Chr11 14035996 14040384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01435 1 786 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 36.962 3.37e-124 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01435 - - gmx:100779720 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00955 08 4852459 4857554 Bva11g01435 11 14035996 14040384 BWGD