Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01427 ATGGGAATTTGCTTTGGGTCTCTCAGCTGCCATGGATCTGATTCTAGCATCAACAGATCTACATATTCAGGGACTGCAAGCACTCAAGGCGGGACCAGAAGCAGCAGTGCTGGAAGGAGTCAATTTTCGGAAATAGCAAGTGGAAGCCTTGCTGCTGATGAGTCCCCTTCTCCAAATGGGCAAATTTTGGAAACGCCCAACTTGAAAGTCTTCAGCTTTGGGGACTTGAGGACGGCTTCTAAGAATTTCAAACCGGATACTTTGCTTGGTGAAGGTGGTTTTGGTAAAGTTTACAAAGGTTGGTTAGATGAGAAGACACTTACACCGGCTAGGGCGGGGTCTGGAATGGTGGTggccataaaaaaattgaatccaGAAAGCATGCAAGGCTTTCAAGAGTGGCAGTCAGAAGTCAACTTCCTCGGAAGGCTTTCTCACCCCAACCTGGTCAAGTTATTGGGTTACTGTGGGGACGAAGAGGAGCTTCTCCTTGTGTACGAGTACATGCCAAGAGGAAGCTTGGAGAATCATCTCTTCAGACCAAGAAACATAGAACCACTTTCTTGGAATATGCGGCTCAAAATAGCTATTGGTGCTGCTAAGGGCCTGGCTTTTTTGCACTCTTCAGAGAAGCAAGTTATATACAGAGATTTCAAGGCATCAAATATACTACTTGATGGGAAATACAATgcaaaaatttcagatttcGGCTTGGCCAAATTGGGGCCTGATGTGGGAGAATCACATGTGACTACTAGAGTCATAGGCACATATGGTTATGCTGCTCCGGAATACATTGCAACAGGGCACTTGTATGTGAAGAGTGATGTGTATGGTTTTGGTGTCGTGCTGCTTGAGATGCTGACAGGCGAACGGGCAATTGATATGAAGAGGCCAAGTAGTGAGCAGAATCTGGTTGATTGGCTTAAGCCAATTCTCcctcaaaaaagaaagttgaagaCCATCATGGATAACAAGATTGAGGGCCAATATACTCTCAAGTTAGCATCACAAACAGCGCAGCTTATTCTAAAATGCATAGAACATGACCCTAAAAAACGTCCTTCGATGATAGATGTACTAGTGGAATTGGAAAAGATTCAAGCTGCACAggataaatcaaaggaatCCAAGATCCACTCTACCACCCAACCTGCAACTCTGCGCCATCACCACCAACATATTTATCAACGGTCTCCGCGTCATGGTAGGGAACTAGGTGCCTG 1226 0.4307 MGICFGSLSCHGSDSSINRSTYSGTASTQGGTRSSSAGRSQFSEIASGSLAADESPSPNGQILETPNLKVFSFGDLRTASKNFKPDTLLGEGGFGKVYKGWLDEKTLTPARAGSGMVVAIKKLNPESMQGFQEWQSEVNFLGRLSHPNLVKLLGYCGDEEELLLVYEYMPRGSLENHLFRPRNIEPLSWNMRLKIAIGAAKGLAFLHSSEKQVIYRDFKASNILLDGKYNAKISDFGLAKLGPDVGESHVTTRVIGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGERAIDMKRPSSEQNLVDWLKPILPQKRKLKTIMDNKIEGQYTLKLASQTAQLILKCIEHDPKKRPSMIDVLVELEKIQAAQDKSKESKIHSTTQPATLRHHHQHIYQRSPRHGRELGA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01427 408 MobiDBLite consensus disorder prediction 372 408 - -
Bva11g01427 408 PANTHER OS01G0588500 PROTEIN-RELATED 35 376 - -
Bva11g01427 408 Pfam Protein tyrosine and serine/threonine kinase 87 362 IPR001245 GO:0004672|GO:0006468
Bva11g01427 408 MobiDBLite consensus disorder prediction 20 39 - -
Bva11g01427 408 ProSitePatterns Protein kinases ATP-binding region signature. 89 122 IPR017441 GO:0005524
Bva11g01427 408 Gene3D Phosphorylase Kinase; domain 1 54 168 - -
Bva11g01427 408 CDD STKc_IRAK 89 367 - -
Bva11g01427 408 ProSiteProfiles Protein kinase domain profile. 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01427 408 SUPERFAMILY Protein kinase-like (PK-like) 67 380 IPR011009 -
Bva11g01427 408 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 35 376 - -
Bva11g01427 408 Gene3D Transferase(Phosphotransferase) domain 1 169 391 - -
Bva11g01427 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01427 Bva-Chr11 14003732 14007259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01427 69 374 Glycoside Hydrolase AT3G07070 50.809 2.23e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva11g01427 PK_Tyr_Ser-Thr 9.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01427 - - gmx:100794193 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00948 08 4809427 4812974 Bva11g01427 11 14003732 14007259 BWGD