Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01421 ATGGCCATTTCTGATGAGAACAATTCGAACTCGATAAAACCCACTAATTTCGGAGTGACGGGAGGGTTAGAAATGGGTAACAGAAAGTTTGGGCAAGAGATTGCGCACAACAGGAGAGCGTTAGGCGTGATTAATCAGAATCTGGTTGAAGGTCGACCGTATCCTTGCGTCGTTAACAAGAGGGGATTGTCAGAAAAGCaagaaattaaggaaaagaagCAGGCGGATCCCGGGCATCGACCGATCACGAGGAGGTTTGCTGCGCAGATTGCTAACTCGCAGCAATCTCAAGCCGAGGAAATCAAGAAGTCAAACCCGTCAATTTCAAATTCGAATGACTTCGGAGCATGTATATTCATTGATGATGAACAAAAACCACCAGCAGACCAGCCAGTGCCCATGTCTCTGGAGAAATCAGAACCAATGCACAGTGAACTCCATCAGATgGAAGAAATTGAGATGGAGGATATAGATGAAGAACCAATTATGGACATTGATAGCTGTGATGCAAATAACCCTCTTGCTGTTTTTGACTATGTTGAAGATCTTTATGCCTCCTACAGAAAAATGGAGAGTATTAGCTGTGTCTCACCAACTTATATGGCTCAACAATTTGACATTAATGAAAGGATGAGGGCTATACTGATAGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCACGAGACTTTGTTCCTTACTGTAAATCTGATAGATAGATTTTTGGAGAAGGAGAAAGTGGTAAGAAAGAAGCTTCAACTGGTTGGCTTGGTTGCCATGCTTTTAGCGTGTAAGTATGAGGAAGTTTCTGTACCTGTAGTTGGGGATCTAATCCTTATATCAGACAAAGCATACACGAGGAAGGAAGTTCTGGAAATGGAGAAGTTGATGCTCAATACACTGCAGTTTAACGTATCAGTGCCAACACCATATGTTTTTATGAGAAGGTTCATAAAAGCAGCTCAAACTGATAAAAAGCTTGAGCTACTGGCTTTCTTCTTGATAGAACTCTCACTTGTGGATTATGAGATGCTCAAGTTCCCACCATCTTTGCTAGCTGCAGCTGCTGTTTATACAGCTCACTGTACCATCTATGGCTTCAAACAGTGGAGTAAGACTTGTGAATGGCATACAAACTACTCTGAAGATCAGCTATTAGAATGCTCAAGTCTGATGGTTGATTTCCACCAGAAGTCAGGGACAGGGAAGCTTACAGGGGTATATAGGAAGTACTGTACCTCCAAATTTTGCTACACTGCAAAATGTGAAGCAGCTCGTTTTCTTCAGGGGAACAAACAGTA 1307 0.4185 MAISDENNSNSIKPTNFGVTGGLEMGNRKFGQEIAHNRRALGVINQNLVEGRPYPCVVNKRGLSEKQEIKEKKQADPGHRPITRRFAAQIANSQQSQAEEIKKSNPSISNSNDFGACIFIDDEQKPPADQPVPMSLEKSEPMHSELHQMEEIEMEDIDEEPIMDIDSCDANNPLAVFDYVEDLYASYRKMESISCVSPTYMAQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKEKVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMLNTLQFNVSVPTPYVFMRRFIKAAQTDKKLELLAFFLIELSLVDYEMLKFPPSLLAAAAVYTAHCTIYGFKQWSKTCEWHTNYSEDQLLECSSLMVDFHQKSGTGKLTGVYRKYCTSKFCYTAKCEAARFLQGNKQ 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01421 435 Pfam Cyclin, N-terminal domain 183 307 IPR006671 -
Bva11g01421 435 CDD CYCLIN 211 300 IPR013763 -
Bva11g01421 435 SMART Cyclin_C_2 310 427 IPR004367 -
Bva11g01421 435 Pfam Cyclin, C-terminal domain 310 424 IPR004367 -
Bva11g01421 435 CDD CYCLIN 308 395 IPR013763 -
Bva11g01421 435 PANTHER CYCLINS 26 430 IPR039361 -
Bva11g01421 435 Gene3D - 182 422 - -
Bva11g01421 435 SUPERFAMILY Cyclin-like 309 426 IPR036915 -
Bva11g01421 435 SMART cyclin_7 314 396 IPR013763 -
Bva11g01421 435 SMART cyclin_7 217 301 IPR013763 -
Bva11g01421 435 Gene3D - 196 308 - -
Bva11g01421 435 PIRSF Cyclin_A_B_D_E 6 435 IPR039361 -
Bva11g01421 435 ProSitePatterns Cyclins signature. 212 243 IPR006671 -
Bva11g01421 435 SUPERFAMILY Cyclin-like 171 307 IPR036915 -
Bva11g01421 435 PANTHER CYCLIN-B2-1 26 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01421 Bva-Chr11 13967296 13970238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01421 1 430 Core Cell Cycle Gene Families AT1G20610 57.737 7.91e-177 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01421 K21777 - gmx:100798068 665.611