Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01420 ATGGCAACTTCTCCACACACTCATCTTCTCCAAAACCCTAATCACCTCCTCAAGAGCCCCACCACCCATAACAATGCTTTCCCTGTTACCTCCGTGCGCACCATGAGCAACACCTCTGGTAGATCTATTTCGATCAAATGCGTCGCACCTACAACCACGCCCACCCAGGATCGTCCATATGTTCCGACCCAATCCCAAGATCGGGTCTTTAACTTTGCTGCTGGACCTGCGACCTTGCCTGAGAACGTGCTCAGGAAGGCCCAGTCGGAGCTCTACGATTGGCGCGGATGCGGCATGAGTGTCATGGAAATGAGCCACAGGGGCAAGGAGTTTCTCTCAATAATCCAGAAGGCTGAAGCGGATCTGCGTACCCTTTTGGATATTCCGGAGGAATACGCTGTTTTGTTCTTGCAAGGCGGCGCCACCACCCAATTTGCTGCGATCCCTTTGAACCTTGTCAATCCGGATGACCCGGTTGATTATTTGGTCACTGGTTCGTGGGGTGACAAGGCGTTCAAAGAGGCTCAGAAGTACTCTAAAGCCAAGGTGATTTGGTCTGGTAAGTCTGAGAAGTACACAAAAATTCCATCTTTCGATGCATTGGAGCAGAGCCCAGATGCCAAGTATTTGCATATATGCGCTAATGAGACCATTCATGGGGTTGAGTTCAAAGATTATCCAACCCCGAAGAATCCAAATGGTGTTTTGATTGCGGATAtgtcttcaaatttctgcTCAAAGCCTGTGGATGTGTCCAAATTTGGGGTGATCTATGCTGGAGCCCAGAAGAACGTGGGGCCAGCTGGTGTCACCATTGTTATTATCAGGAAAGATCTAATTGGCAATGTTCAGGGGGTGACTCCCGTGATGCTTGATTACAAGATACAATCTGAGAACAACTCACTATACAACACTCCCCCTTGTTTCTGTATTTACATGTGTGGTTTGGTGTTTGAAGACCTTTTGGAGCAAGGGGGTCTGAAAGAGGttgagaagaagaacaagaagaaggcTGAAATTCTCTACAACGCCATTGATGAAAGCAATGGTTTTTATAGATGCCCAGTTGAGAAATCAGTGAGATCGTTGATGAATGTTCCATTTACATTGGAGAAATCAGAATTAGAGGCTGAGTTTATCAAGGAAGCAGCTAAGGAAAAGATGGTTCAGCTTAAGGGGCATAGATCAGTGGGAGGCATGCGAGCTTCCATATACAATGCCATGCCTTTGGCTGGTGTTGAGAAGTTGGAAGCTTTCATGAAGGATTTCCAGGTCAGACACGCATA 1286 0.458 MATSPHTHLLQNPNHLLKSPTTHNNAFPVTSVRTMSNTSGRSISIKCVAPTTTPTQDRPYVPTQSQDRVFNFAAGPATLPENVLRKAQSELYDWRGCGMSVMEMSHRGKEFLSIIQKAEADLRTLLDIPEEYAVLFLQGGATTQFAAIPLNLVNPDDPVDYLVTGSWGDKAFKEAQKYSKAKVIWSGKSEKYTKIPSFDALEQSPDAKYLHICANETIHGVEFKDYPTPKNPNGVLIADMSSNFCSKPVDVSKFGVIYAGAQKNVGPAGVTIVIIRKDLIGNVQGVTPVMLDYKIQSENNSLYNTPPCFCIYMCGLVFEDLLEQGGLKEVEKKNKKKAEILYNAIDESNGFYRCPVEKSVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLEAFMKDFQVRHA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01420 428 SUPERFAMILY PLP-dependent transferases 67 423 IPR015424 -
Bva11g01420 428 TIGRFAM serC_1: phosphoserine transaminase 69 427 IPR022278 GO:0004648|GO:0006564
Bva11g01420 428 CDD PSAT_like 70 424 IPR022278 GO:0004648|GO:0006564
Bva11g01420 428 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 39 428 IPR022278 GO:0004648|GO:0006564
Bva11g01420 428 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 1, CHLOROPLASTIC 39 428 - -
Bva11g01420 428 MobiDBLite consensus disorder prediction 1 23 - -
Bva11g01420 428 PIRSF SerC 63 428 IPR022278 GO:0004648|GO:0006564
Bva11g01420 428 Gene3D Aspartate Aminotransferase, domain 1 324 428 IPR015422 GO:0003824
Bva11g01420 428 Hamap Phosphoserine aminotransferase [serC]. 67 427 IPR022278 GO:0004648|GO:0006564
Bva11g01420 428 Pfam Aminotransferase class-V 69 416 IPR000192 -
Bva11g01420 428 ProSitePatterns Aminotransferases class-V pyridoxal-phosphate attachment site. 254 273 IPR020578 -
Bva11g01420 428 Gene3D - 82 322 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01420 Bva-Chr11 13965098 13966690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01420 K00831 - zju:107424359 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01420 11 13965098 13966690 Bva08g00942 08 4777963 4779679 BWGD