Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01398 ATGGCAGCAGCATCAGGATCAGCACCAGTGGGGGGAGACATATGGAAGGCCCATATGGCTATGGCGCTGGTGCAACTCTTCAATGGAGGATACCATGTCATCACCAAAGTGGCCCTCAACGTTGGGGTCAACCAATTAGTCTTCTGTGTCTACCGTGATCTCATTGCCCTGACGATACTTGCTCCTATTGCTTATTTCCGAGAAAAACGGACCCGACCACCCATGACTAGGCGCCTCTTGATgtcattcttctttcttggatTAACTGGGATATTTGGCAACCAGCTCTTGTTTCTTCTTGGTTTAAGCTATACTAATCCAACTTACGCTGCTGCAACACAGCCAGCCATTCCCGTCTTTACGTTTATTTTGGCTGTACTCATGGGTACAGAAAGAGTGAACTTGCTAACATCTGAAGGTCATACAAAGGTTGGAGGAACTGTTATTTGTGTTTCGGGGGCCATATTTATGGTTTTGTATCGAGGCCCAGCATTGATAGGTTATTCAGAAATGGACCTTGTAgttcaaaatgaaataagtgCCAGAGGTCAACCGGAACCTGCTGGGTGGTTAGTTGGCGGTTTCATGGATCTTGGTTTCAACCATTTTCATCTTGGGGTTTTGTGCTTGATAGGGAATTGCATGTGCATGGCTGCTTTTCTAGTCATTCAGGCCCCAGTATTGAAGAAGTATCCTTCCAACTTGTCTGTCACAGCATACTCGTACTTTTTTGGAGCTGCATTCATGGTGCTAACAGCGTTGATAATGAGCGATGATTCTATTGACTGGAGTTTGACACAATCTGAAATATTTGCTGTTGTTTATGCTGGAACCATTGCATCCGCCGTCAATTATGGACTCTTGACTTGGTGCAATAAGATCTTGGGACCATCTTTAGTTGCTCTTTATAATCCACTTCAACCTGCAGCTTCAGCTATCTTATCACAACTTTTCCTTGGAAGCCCAATTTACCTAGGAAGTGTTATTGGAGGAGGTTTGATTATTGCTGGGCTATATGCGGTTACTTGGGCATCCCACGTAGAAAGACAAGCAGCAGCTGTGGGAGTTCTTCCTCACAATTCTCGAACCTCTGAACCGCTTATTCATAAGGATGGGCTAATTAACAAGACCACATACCAGATAGGACAGATTTTTTCAGGTTCCTCAAGTGTATTACCAAAGTCTTCCGATTA 1193 0.4325 MAAASGSAPVGGDIWKAHMAMALVQLFNGGYHVITKVALNVGVNQLVFCVYRDLIALTILAPIAYFREKRTRPPMTRRLLMSFFFLGLTGIFGNQLLFLLGLSYTNPTYAAATQPAIPVFTFILAVLMGTERVNLLTSEGHTKVGGTVICVSGAIFMVLYRGPALIGYSEMDLVVQNEISARGQPEPAGWLVGGFMDLGFNHFHLGVLCLIGNCMCMAAFLVIQAPVLKKYPSNLSVTAYSYFFGAAFMVLTALIMSDDSIDWSLTQSEIFAVVYAGTIASAVNYGLLTWCNKILGPSLVALYNPLQPAASAILSQLFLGSPIYLGSVIGGGLIIAGLYAVTWASHVERQAAAVGVLPHNSRTSEPLIHKDGLINKTTYQIGQIFSGSSSVLPKSSD 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01398 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
Bva11g01398 397 PANTHER WAT1-RELATED PROTEIN 14 389 - -
Bva11g01398 397 PANTHER WAT1-RELATED PROTEIN 14 389 IPR030184 GO:0016021|GO:0022857
Bva11g01398 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 346 - -
Bva11g01398 397 Pfam EamA-like transporter family 205 342 IPR000620 GO:0016020|GO:0016021
Bva11g01398 397 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01398 Bva-Chr11 13881799 13885923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01398 100 371 Nodulin-like Gene Family AT5G45370 66.182 1.47e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01398 - - jre:108986431 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01398 11 13881799 13885923 Bva11g01398 11 13881799 13885923 ECH