Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01396 ATGCCACAACAAAACTGCACAGCACCAAAACCAGAATACTGCAGTAATCACACTATGGAAGGACCGCCACAGATGACAGAGCCTCATAACTCAACTGTGGTTGCCTACCCCATAAGAAGCAATGAACAGTCTTTTCCAACACTCGCTTTGTACCCCATAACTTTGAAGTTCGAGGAATTGGTGTACAAAATTAAACTAGAACAGAAAGCACCATGCTGGAGCACATGGGCTAGCAAAGAGAAAACCATACTGAATGGGATTACAGGTATGGTTTGCCCAGGTGAAATACTGGCTATGCTGGGCCCTTCTGGCAGTGGCAAAACCACACTTCTCACTGCTCTTGGAGGCCGTCTCAGTGGTAAATTATCTGGGAAAATCACATACAACAACCAACCTTTCTCAGGTTCCATAAAAAGAAGAACAGGGTTTGTGGCTCAAGACGATGTTTTATACCCTCATCTCACTGTTTCTGAAACACTAATATTCACTGCACTTCTAAGGCTTCCCAATAGCTTGACAAGGGATGAGAAAGTTCAGCACGCAGAGAGAGTCATCACTGAGTTAGGACTCACTCAGTGCAGGAACAGTATGATAGGAGGACCACTTTTCAGAGGCATATCAGgtggagagaaaaagagagtcaGCATAGGTCAAGAAATGCTCATCAATCCAAGCCTTCTGCTTCTTGATGAGCCCACTTCAGGCTTGGACTCTACCACAGCTCAAAGGATTCTAACCACAATCAAAAAGCTTGCTAGTGGGGGTAGAACTGTCATCACCACCATCCATCAACCCTCTAGCCGCCTCTACCATATGTTTGATAAGGTGGTTTTGCTGTCTGAAGGTTGCCCCATCTATAATGGCCCAGCTTCAACAGCTTTGGATTATTTTTCATCCATTGATTTTTCTACATCTATGACTGTCAATCCAGCCGATCTCATGCTTGATCTTGCCAATGGGATTGCCCCAGACTCCAAGAATGCAGCTGAACAAAGTGAGAGcctggaaaaagaaaggaagcagGTGAGAGAAACACTCATCTCTGCTTATGAAAAGAGcatagcttcgaagttgaaaACTGAGCTTTGCAGCTTGGAGATGAACAACTACATTGCCACAAAAGATGCTACTGCAAGAAATGGCATAAAAGCGGAGCAATGGAGCACAAGCTGGTGGCATCAGTTCAAGGTACTGTTACAGAGGGGGCTGAGGGAGAGAAGGTATGAAGCATTCAACAGGCTAAGAATATTCCAAGTCATAAGTGTCGCTTTTCTTGGTGGACTCTTGTGGTGGCATACTCCACAATCACACATTGGAGACAGGATTGccttgctgtttttcttttctgttttctgggGATTCTATCCTCTCTACAATGCAGTTTTCACATTTCCtcaagaaagaagaatgcTGATAAAGGAACGGTCATCGGGAATGTATCGCCTTTCTTCATACTTTCTAGCTAGAACTATAGGAGACATGCCACTGGAGCTTGCACTTCCAACTGcatttgttttcattatcTATTGGATGGGAGGGCTTAAACCAGATCCTGTGACTTTTATCCTTTCCCTTCTTGTGGTTCTTTACAGTGTTCTTGTATCTCAAAGTCTTGGCTTAGCATTTGGTGCTATTCTGATGGAGATTAAACAGGCAACTACTTTAGCTTCTGTCACAACCCTCGTGTTTCTCATTGCTGGAGGATACTATGTACAGCAAATTCCTTCCTTCATAGTATGGCTCAAGTACTTAAGCTACAGCTACTACTGCTACAAGCTTCTTCTTGGTGTCCAGTACAATGAAGATGACTATTATGAGTGTTCAAATGGGGATGTGTGCAGGGTCGGTGATTTTCCTGCAATCAAATCAATGGGCTTGAATAACTTATGGGTTGACGTGTGCATTATGGCTCTAATGTTGGTGGGTTATCGACTAGTTGCTTATTTAGCACTACGTAGAGTGAGATA 1967 0.4118 MPQQNCTAPKPEYCSNHTMEGPPQMTEPHNSTVVAYPIRSNEQSFPTLALYPITLKFEELVYKIKLEQKAPCWSTWASKEKTILNGITGMVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNNQPFSGSIKRRTGFVAQDDVLYPHLTVSETLIFTALLRLPNSLTRDEKVQHAERVITELGLTQCRNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILTTIKKLASGGRTVITTIHQPSSRLYHMFDKVVLLSEGCPIYNGPASTALDYFSSIDFSTSMTVNPADLMLDLANGIAPDSKNAAEQSESLEKERKQVRETLISAYEKSIASKLKTELCSLEMNNYIATKDATARNGIKAEQWSTSWWHQFKVLLQRGLRERRYEAFNRLRIFQVISVAFLGGLLWWHTPQSHIGDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDMPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPSFIVWLKYLSYSYYCYKLLLGVQYNEDDYYECSNGDVCRVGDFPAIKSMGLNNLWVDVCIMALMLVGYRLVAYLALRRVR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01396 655 CDD ABCG_EPDR 52 288 - -
Bva11g01396 655 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 32 653 - -
Bva11g01396 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 300 IPR027417 -
Bva11g01396 655 ProSitePatterns ABC transporters family signature. 206 220 IPR017871 GO:0005524
Bva11g01396 655 Pfam ABC transporter 84 234 IPR003439 GO:0005524
Bva11g01396 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 306 IPR003439 GO:0005524
Bva11g01396 655 Coils Coil 325 352 - -
Bva11g01396 655 Pfam ABC-2 type transporter 394 599 IPR013525 GO:0016020|GO:0140359
Bva11g01396 655 SMART AAA_5 93 283 IPR003593 -
Bva11g01396 655 MobiDBLite consensus disorder prediction 1 28 - -
Bva11g01396 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 32 653 - -
Bva11g01396 655 Gene3D - 74 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01396 Bva-Chr11 13860979 13864013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01396 83 282 Calmodulin-binding Proteins AT2G36910 29.858 3.91e-13 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01396 11 13860979 13864013 Bva11g01396 11 13860979 13864013 ECH