Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01372 ATGCCAGATATTATCAaggaagttgagaaatttgaagtgACATTTAGCAGGAAGAGTGTTGTGAAAGCTATGAATCCTTTGCCAGAGCCTATTTCAATCACTCTCTCAAATCTTGACCTACTTTCAGGTCGTTTTCCAATTACATACTTGTATTTCTACCGCAAACCAAAACTAGGTGACAACTTTAGAGATCTTGTCGAGGCTCTTAAGAACTCTCTAGCACAAACACTAGAATACTACTACCCCTTTGCTGGCCAAATTGTTGTAAACCCCAAAACTAGTGAGCCTCAAATCACCTGTGACAACAATGGTGCTCTAGTTATTGAAGCTCACGCCAATTTCCCACTGAAGAAATTCGATTTCTACAATCTTAATGAAACTATTCAAGAAAAGTTAGTGTCTTTTCAGCCAGACTTCCCCTTGCAAATCCAGATAACAGAGTTTACTTGTGGAAGCACTTCCATAGCATTTACCTTTGACCATGCTCTAGGTGATGCAAGTGCTTTCGGTAGATTTCTTTCCTCGTGGTCTGAAATAGCTCAGAATAAGCCACTGTCATGCCTACCAGATCATACTAGACAGCTTCGTCCACGTTTGCCTCCCAAATATCATCCATCCTTGGATCAAACTTTTATCAAGTGCACCATAGAAGAGATAAGGAACATGCCAATGAACCACATCACGCTTAAGCGCCTTTATCATGTCAATGCATCGAGTATTGATATGCTACAGAAACTTGCATCTGCTGATgggaaaaagagaacaaagatTGAGGCTTTCTCAGCCTATGTGTGGAAGAAAATGGTTGGTACCATTGATCAAAACCTTGAAAAATGCAAGATGGGCTGGTTAATAGATGGACGTGAGAGAATGGGCAGGGATAAGAGTTCCATGTCAAATTACATTGGTAATGTCATTTCTTTGGCTTTTGGGGAGGCTAGCATTCAAGAACTAAAGGAAGCCCCTATTTCAAACGTTGCCAATATTGTGCATGAAGCAATTTCAGGGGTGACCAATGAGGCTCACTTCTTGGATTTGATCGATTGGGTTGAATGTCATAGACCTGGTTTAATGCTAGGAAAAGCAGTGTTGGGTCAGCAAGGACCTACCCTGGTGTTGTCTTCAGGAAGAAGGTTCCCAGTGTCTCAAGTTGACTTTGGATTTGGAAGTCCCTTACTTGGGACTGTGTATACCTCCATCGAAAGGAGTGGAGTTGGTTATATCAACCAAAGGCAAAGTGCTAGTGATGATGGCTCATGGACTTTGTCAGCTATCCTATGGCCAGAATTGGCTGCTGCACTGGAGACTGACCCTATTTTTCAGCCCATGTCTGCTTCACATCTTCAAGTTTA 1352 0.4083 MPDIIKEVEKFEVTFSRKSVVKAMNPLPEPISITLSNLDLLSGRFPITYLYFYRKPKLGDNFRDLVEALKNSLAQTLEYYYPFAGQIVVNPKTSEPQITCDNNGALVIEAHANFPLKKFDFYNLNETIQEKLVSFQPDFPLQIQITEFTCGSTSIAFTFDHALGDASAFGRFLSSWSEIAQNKPLSCLPDHTRQLRPRLPPKYHPSLDQTFIKCTIEEIRNMPMNHITLKRLYHVNASSIDMLQKLASADGKKRTKIEAFSAYVWKKMVGTIDQNLEKCKMGWLIDGRERMGRDKSSMSNYIGNVISLAFGEASIQELKEAPISNVANIVHEAISGVTNEAHFLDLIDWVECHRPGLMLGKAVLGQQGPTLVLSSGRRFPVSQVDFGFGSPLLGTVYTSIERSGVGYINQRQSASDDGSWTLSAILWPELAAALETDPIFQPMSASHLQV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01372 450 Gene3D - 7 209 IPR023213 -
Bva11g01372 450 Pfam Transferase family 12 435 - -
Bva11g01372 450 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 33 447 - -
Bva11g01372 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 33 447 - -
Bva11g01372 450 Gene3D - 210 436 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01372 Bva-Chr11 13734756 13736108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01372 36 429 Monolignol Biosynthesis Gene Families AT5G48930 26.265 4.30e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01372 - - gmx:100795616 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01372 11 13734756 13736108 Bva11g01372 11 13734756 13736108 ECH