Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01360 ATGTCCCTTCTTAGTAGATTCTTCCACAAAAGACCCCCAGATGGATTGTTTGAATTTGCTGACAGAGTCTTTGTTTTTGACTCCTGCTTCTCCACCGAAGCATTGCCTGATGGAATATACCAAATTTATCTACATGAAATCATTACTGAATTATATGAAGAATTCCCGGAATCGAGGTTTCTCGCTTTCAATTTTCGTGATGGTGAGAAACGTAGCCAATTTGCTGAATTTCTTTGCGAATAcgattttgttgttttagacTTTCCCAGACAATACGAAGGCTGTCCCCTTCTCCCATTTTCTCTGGTTCAACATTTTCTTCGCGCTTGTGAGAGCTGGCTTTCCCGAAGGAATCAACAGGATGTGATCCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTGGCGTTCCTTTTAGCtagctttttaattttcaggaGGCTGCATAGTGGGGAACGTAGAACTCTTGAAAAGGTTCATAAGGAGGCACCCAGAGGCTTTTTACAGCTATTGTCACCTTTGAACCCTTTGCCATCTCAGCTTCGTTACATTCAGTATGTAGCAAGAAGGAATATAACATTAATTCCTGAGTGGCAGTGGCACCCTCCAGAGCGAGCTCTTTGTCTAGATTGTGTCATTCTCCGATCCATTCCTAGTTTTGATTCCCATAATGGCTGCAGACCACTGATCCGCATTTTTGGTAGAAATCTTCAAGGTAACAGTGGGCTTTCTACTCACATGCTCTACTCTATGCACCGGAAGAAGAAGACTTTAAGGCATTACATCCAGGCAGACTGTGATGTGATCAAGATTGACATTCAATGTTCAGTACAAGGAGACGTGGTGTTGGAGTGTGtgcatttggatttggattcgGAAATGGAAGTAATGATGTTTCGTATAATGTTCAACACGGCCTTTATTCGTTCCAACATATTGATGCTCAACGCTGAAAACTTGGACATTCTCTGGGATTCAAAGGAGCGGTACCCAAAAGGCTTCAGGGCAGAGGTTTtatttggagaagttgagaGCATGTCTCCTCCAAGGACACCAAGAACCATTTTGAATGATGAGATGGGTGGATTGCCCATTGAAGCTTTTTCAAGGGTTCAAGAACTTTTTAGTGATGAAGAGTGGGTTGATAGTGGGGATGCTGCTGCTGCCTGGTTGCTTAAACATCTCTCTGTCTTAGGTGATGTCAAAGAGCCTTCAAGGTTTCACACTAAAGCAAGCTGGTACTCTTCACCTGCTGACtctgaagatgaaaataatgaatcaAGCATTGCTGATAGTTCAGATGAAGCATTCGATGCCACCCCCAAGTCTTCTGCTGATTCATTGAAATTATTGACACCTGAAAACCCTGATCCAGTCCATTTAGCTTATGAAAGTGATAGTGGAAATCATGTAACTGATCAttcattaattgaaaatgttcCGTTATCTCTTAATACTGCAAGTAAAAACTGTTCTTCTCCATCAGCACCTCCCCCAATTACTGCTACTCAACCTCTGCCACCAAAACTGGCACCTCCTTCTCCACCAATGTATAATGAAGGGCCTCCTCTAGTTTCACCTCCACTGCTACCTCCACCTCCACCTTCACCTTCAATGGTGACCCGTACCGGGCTTCCTCCGCCACCCCCTCCCCCTCTTCCACTTCTTTCTAATATCTATGAAAATTCTTGTATAGTTCCAACATCTTCAGCTACAAATAGAGTCCCTCCACCACCTCCTCCCCCACCACCCCCTCCTGTCTCTTACAAAGCTTCCCCGCCACCAGGGCCACCCCAACCACCTCCCCCTAACTTATCAACTTCTAATAAACAAACTTTGCTGTCTCCGCCACCCCCTCCCCCTTATCCCTCAACTTCTAAACAACAAAGGTTGCCACCAATGGCACCGCCACCCCCACCCCCACCACCTCCACCTCTACAGTCAAAAGTGACGACTTCATCATCTGCTTATAAACCTACCCACGAGGTAGGACCACCACCACCTCCTCCTTCCACAGGTAACAATGCTATGAATGCTTGTAGATTACCTCCATCTCCTCTAGGTCGCAATGCTAATAACGCTCTGTCTCCGCCTCCACCTCCTCCAGGACCCGTACGAACAAGTTCAGGACTCccacctccacctccacctccaAGGCCTCCAAATGCTCCCCCACCACCACCTAGTCGGAGTGCAGCACCAGCTGCACCCCCACCCCAACCATCATCTATTGCCAAAGGAAAAGTTTCTTCAGCATCAACAAACGTTGGGAGAGGTCGAGGTACAGGTGGCACTGCTAGTGCCCCTAAGAGAACTTCGTTAAAGCCCTTGCATTGGGTGAAAGTCACTCGACCTACGCAAGGGAGTCTATGGGCTGATTCACAGAAAGAAGATAATCAATCAAGGTCCCCTGAAATAGATATTTCGGAACTTGAGAGTCTCTTCTCAGCAGCATCTGTTCCTGATGGGAGCAGTGCTAAAGGTGGAGGTCGCCGTGGTTCTTACATCAACAAACCTGAGAAAGTACAATTGGTTGACTTGCGGAGAGCTTATAACTCTGAAATTATGctgtcaaaaatcaaaattcccTTGCCATATATGCTTAATGCAGTTCTGGCGTTGGATTcttctattcttgacattgaTCAGGTTGAGAATCTCATTAAGTTCTGTCCCAAAAAGGAAGAGATGGAGTTGTTGAAGaattaTACGGGGAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTCATGGAGCTGATGAAGGTTCCTCGAGTAGAATCTAAGTTAAGAGTATTTGCTTTTAAAATCACCTTTTCCAGTCAGGTGAACGATTTGAGATTAAACTTGAATACAATCAATGCTGCTGCTAGAGAGGTGAAAGAATCTGTGAAGTTGCGTCAAATTATGCAAACTATTCTCACTTTGGGCAATGCCTTGAATCAGGGAACGGCACGAGGATCTGCAGTAGGGTTCAAATTGGATAGCCTTCTTAAATTACCTGACACTCGTgcaagaaataacaaaatgacTTTAATGCATTATTTATGTAAGCTTCTTTCTGAGAAAATGCCGGAATTGCTAGATTTTGACAAGGATCTTGTCCATTTAGAAGCAGCATCTAAGATACAATTAAAAGCTTTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTCTAGAGAAAGTTGAGCAAGAACTCACTGCTTCAGAAAATGATGGTGCTGTATCTGCAGGGTTCCGCAAGGTGTTGAAGAGTTTTCTTGATATCGCTGAAGCTGATGTGAGGACACTTATATCATTGTATTCTGAAGTGGGACGAAAAGCTGATTCTTTGTCACATTACTTTGGAGAGGATCCAGCTCGGTGCCCCTTTGAGCATGTGACACAAATCCTGGTTGTCTTTGTTAAGACGTTCAAAAAGTCAAGGGAGGAGAATGAAAGGCAGGCAGATCTTGAAAAGAAGAGACTAGAAAAAGAAGCCATGAAGGAACGGACAGCAACTAATGCACTTGCCAAAAAAGATGGTATTTA 3530 0.4238 MSLLSRFFHKRPPDGLFEFADRVFVFDSCFSTEALPDGIYQIYLHEIITELYEEFPESRFLAFNFRDGEKRSQFAEFLCEYDFVVLDFPRQYEGCPLLPFSLVQHFLRACESWLSRRNQQDVILLHCERGGWPLLAFLLASFLIFRRLHSGERRTLEKVHKEAPRGFLQLLSPLNPLPSQLRYIQYVARRNITLIPEWQWHPPERALCLDCVILRSIPSFDSHNGCRPLIRIFGRNLQGNSGLSTHMLYSMHRKKKTLRHYIQADCDVIKIDIQCSVQGDVVLECVHLDLDSEMEVMMFRIMFNTAFIRSNILMLNAENLDILWDSKERYPKGFRAEVLFGEVESMSPPRTPRTILNDEMGGLPIEAFSRVQELFSDEEWVDSGDAAAAWLLKHLSVLGDVKEPSRFHTKASWYSSPADSEDENNESSIADSSDEAFDATPKSSADSLKLLTPENPDPVHLAYESDSGNHVTDHSLIENVPLSLNTASKNCSSPSAPPPITATQPLPPKLAPPSPPMYNEGPPLVSPPLLPPPPPSPSMVTRTGLPPPPPPPLPLLSNIYENSCIVPTSSATNRVPPPPPPPPPPPVSYKASPPPGPPQPPPPNLSTSNKQTLLSPPPPPPYPSTSKQQRLPPMAPPPPPPPPPPLQSKVTTSSSAYKPTHEVGPPPPPPSTGNNAMNACRLPPSPLGRNANNALSPPPPPPGPVRTSSGLPPPPPPPRPPNAPPPPPSRSAAPAAPPPQPSSIAKGKVSSASTNVGRGRGTGGTASAPKRTSLKPLHWVKVTRPTQGSLWADSQKEDNQSRSPEIDISELESLFSAASVPDGSSAKGGGRRGSYINKPEKVQLVDLRRAYNSEIMLSKIKIPLPYMLNAVLALDSSILDIDQVENLIKFCPKKEEMELLKNYTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLRLNLNTINAAAREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLPDTRARNNKMTLMHYLCKLLSEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAVSAGFRKVLKSFLDIAEADVRTLISLYSEVGRKADSLSHYFGEDPARCPFEHVTQILVVFVKTFKKSREENERQADLEKKRLEKEAMKERTATNALAKKDGI 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01360 1176 MobiDBLite consensus disorder prediction 411 472 - -
Bva11g01360 1176 PRINTS Proline rich extensin signature 513 525 - -
Bva11g01360 1176 PRINTS Proline rich extensin signature 491 507 - -
Bva11g01360 1176 PRINTS Proline rich extensin signature 577 602 - -
Bva11g01360 1176 PRINTS Proline rich extensin signature 528 549 - -
Bva11g01360 1176 Gene3D - 201 346 - -
Bva11g01360 1176 Coils Coil 1139 1159 - -
Bva11g01360 1176 MobiDBLite consensus disorder prediction 498 556 - -
Bva11g01360 1176 Pfam Formin Homology 2 Domain 768 1139 IPR015425 -
Bva11g01360 1176 PANTHER FORMIN-J 1 663 - -
Bva11g01360 1176 PANTHER FORMIN-J 694 1168 - -
Bva11g01360 1176 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 51 187 IPR029021 -
Bva11g01360 1176 Coils Coil 1045 1072 - -
Bva11g01360 1176 Gene3D Protein tyrosine phosphatase superfamily 15 191 IPR029021 -
Bva11g01360 1176 ProSiteProfiles Formin homology-2 (FH2) domain profile. 764 1164 IPR015425 -
Bva11g01360 1176 ProSiteProfiles C2 tensin-type domain profile. 204 343 IPR014020 -
Bva11g01360 1176 MobiDBLite consensus disorder prediction 572 605 - -
Bva11g01360 1176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 204 343 IPR035892 -
Bva11g01360 1176 SMART PTEN_C2_2 202 342 IPR014020 -
Bva11g01360 1176 MobiDBLite consensus disorder prediction 613 648 - -
Bva11g01360 1176 MobiDBLite consensus disorder prediction 744 769 - -
Bva11g01360 1176 SMART it6_source 543 1176 IPR015425 -
Bva11g01360 1176 MobiDBLite consensus disorder prediction 488 804 - -
Bva11g01360 1176 MobiDBLite consensus disorder prediction 693 741 - -
Bva11g01360 1176 Pfam C2 domain of PTEN tumour-suppressor protein 203 341 IPR014020 -
Bva11g01360 1176 Gene3D Formin, FH2 domain 765 1150 IPR042201 -
Bva11g01360 1176 SUPERFAMILY Formin homology 2 domain (FH2 domain) 777 1158 - -
Bva11g01360 1176 MobiDBLite consensus disorder prediction 430 450 - -
Bva11g01360 1176 MobiDBLite consensus disorder prediction 1146 1176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01360 Bva-Chr11 13676130 13682204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01360 753 1176 FH2 protein (formin) Gene Family AT1G31810 78.538 0.0 645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01360 11 13676130 13682204 Bva11g01360 11 13676130 13682204 ECH