Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01355 ATGTCAGAGTCCAGTGAGCAAGAGGACGCGTCGGTTCGGGAGGTCCGCGCAAATGGAAGTAGCATTAACACAGAAGAAGTCGAAGCAAAGCTAGATCAAGGAAACATTGAAGAAGCTGAAGCTTCTTTGCGAGAGGGGTTATCACTCAACTCTGAGGATGCACGAGCTCTTCTTGGGAAGTTGGAGTATCTGAGGGGTAATGTAGAAGGTGCTCTTCACGTGTTTGAGGGTATTGACCTCCAAGCTGCCATACAGCGGTTACAATCTACCCTTTCCGAAAAACCATCCGCCAAGAAAGGTCGCCCTCAAGGCGAATCAGCTCCCTCAGCCTCGCAACATGCTGCTAGTTTGGTCCTTGAAGCCATCTACTTAAAAGCCAAGTCTTTACAGAAGCTGGGGAAGTTTACTGAAGCTGCTAATGAATGCGAAAGTGTGCTTGATGCCGTGGAGAAGGTATTTAGTCAGGGTATACTTGATGTTCAAGTGGATAATAAGTTGCAAGAGATAGTCAGCCGTGCGGTAGAGCTACTTCCAGAGCTTTGGAAGCGGGCCGGCAGTTATGATGAGGCCATATCCGCTTATAGGCGTGCCCTTTTTAGTCAATGGAACCTTGATAATGATTGCTGTGCTAGAATTCAGAAAGGGTTTGTTGTGTTTTTGTTGTACAGTGGGGTGGAGGCTGGCGCACCTAGTTTAGCAGTTCAGATTGAGGGGTCTTATGTGCCTAAAAATAATCTGGAAGAGGCAATTCTTCTTCTGATGATTGTTGTAAGGAAGTTTTGCCTTGGTAAGACCAAATGGGATCCTTCAGTGATGGAACACTTGAATTTCGCACTCTCTATCTGTAACCAAACTTGTGTTTTAGCAAAGCAACTGGAAGAGTTAATGCCTGGTGTATATCATCGTATTGACCGTTGGAATTCTTTAGCTTTATGTCATAGCGGAGCTGGACAAAACAAGAGTGCTATGAATCTACTGAGGAAGTCTTTGCACAAACATGAACGACCAGATGACGTCGTGTCGTTATTATTGGCTGCCAGGATCTGCAGTGAGGATCCATATCTTGCTGCTGAGGGAGTGGTGTATGCAGAGAGGGCCATTAGTAATTGTCAGGGTCTGCATGAGCATTTGAAAGGTGTGAGTCTACGGATGTTGGGACTTTGTCTAGGAAAACAAGCCAAGGTTGCTTCCTCTGACTTTGAGAGATCTAACCTTCAGTCCAAAGCTCTGAAATCACTGGAGGAGGCAATTCGATTGGAATATAACAATcctgatttgatttttgagtTGGCTGTTCAATATGCAGAGCACCGGAATCTGACTACTGCTTTGCGGTGTGCAAAGCAGTTCTTTGATGAAACAGGTGGCTCTATATTGAAAGGTTGGAGGCTGCTTGCTCTGATTTTGTCTGCTCAACAAAGATTTTCAGAGGCTGAAGTGGTGACAGATGCTGCATTAGATGAGACTGCAAAATGGGAGCAAGGGCCACTGCTTAGACTGAAAGCAAAACTGAAGATTTCCCAGTCACGAGCAATGGACGCTATTGAGACCTTCCGGTACCTCCTAGCATTGGTTCAAGCCCAGCGGAAATCCTTTGGGCCCCTCAAAAATACTTCACTGGTTGAGGATGATAGAGTAAGTGAATTTGATGTTTGGCATGGTCTGGCAAATTTATATGCAAGCCTCTCTCATTGGAAGGATGCTGAAGTATGTTTGCAAAAGGCCAGAGAGTTGAAGCAGTACTCGGCGGCAGCACTCCACACAGAAGGTATTATGGCTGAAGGACGGGGACAATATCATGAAGCTGTTGCTGCTTATATTAATGCTGCACTTGTTGAACCAAGCTATGTTCCAAGTAGGAATTCATTAGGTGCTTTGTTGCTTCAAACGGGTTCACAGGCTTTGCCTGTGGCTAGGAGCTTACTCTGTGATGCACTAAGGATAGATCCCACCAACCGCTTGGCTTGGTATCATTTGGGAAGGGTTCACAAGGATGATGGCCGAATAGGCGATGCTGCTGACTGCTTTCAAGCAGCTTCCATGCTTGAAGAATCTGATCCTATTGAAGGTTTCAGCACTCTTCTTTG 2087 0.4547 MSESSEQEDASVREVRANGSSINTEEVEAKLDQGNIEEAEASLREGLSLNSEDARALLGKLEYLRGNVEGALHVFEGIDLQAAIQRLQSTLSEKPSAKKGRPQGESAPSASQHAASLVLEAIYLKAKSLQKLGKFTEAANECESVLDAVEKVFSQGILDVQVDNKLQEIVSRAVELLPELWKRAGSYDEAISAYRRALFSQWNLDNDCCARIQKGFVVFLLYSGVEAGAPSLAVQIEGSYVPKNNLEEAILLLMIVVRKFCLGKTKWDPSVMEHLNFALSICNQTCVLAKQLEELMPGVYHRIDRWNSLALCHSGAGQNKSAMNLLRKSLHKHERPDDVVSLLLAARICSEDPYLAAEGVVYAERAISNCQGLHEHLKGVSLRMLGLCLGKQAKVASSDFERSNLQSKALKSLEEAIRLEYNNPDLIFELAVQYAEHRNLTTALRCAKQFFDETGGSILKGWRLLALILSAQQRFSEAEVVTDAALDETAKWEQGPLLRLKAKLKISQSRAMDAIETFRYLLALVQAQRKSFGPLKNTSLVEDDRVSEFDVWHGLANLYASLSHWKDAEVCLQKARELKQYSAAALHTEGIMAEGRGQYHEAVAAYINAALVEPSYVPSRNSLGALLLQTGSQALPVARSLLCDALRIDPTNRLAWYHLGRVHKDDGRIGDAADCFQAASMLEESDPIEGFSTLL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01355 695 PANTHER CALMODULIN-BINDING PROTEIN 3 694 - -
Bva11g01355 695 Pfam Tetratricopeptide repeat 28 74 - -
Bva11g01355 695 SUPERFAMILY TPR-like 29 198 IPR011990 GO:0005515
Bva11g01355 695 Gene3D Tetratricopeptide repeat domain 20 203 IPR011990 GO:0005515
Bva11g01355 695 Gene3D Tetratricopeptide repeat domain 278 452 IPR011990 GO:0005515
Bva11g01355 695 Gene3D Tetratricopeptide repeat domain 453 689 IPR011990 GO:0005515
Bva11g01355 695 MobiDBLite consensus disorder prediction 1 33 - -
Bva11g01355 695 SUPERFAMILY TPR-like 119 444 IPR011990 GO:0005515
Bva11g01355 695 SMART tpr_5 549 582 IPR019734 GO:0005515
Bva11g01355 695 SMART tpr_5 653 686 IPR019734 GO:0005515
Bva11g01355 695 SMART tpr_5 459 492 IPR019734 GO:0005515
Bva11g01355 695 SMART tpr_5 119 152 IPR019734 GO:0005515
Bva11g01355 695 SMART tpr_5 20 53 IPR019734 GO:0005515
Bva11g01355 695 SMART tpr_5 303 336 IPR019734 GO:0005515
Bva11g01355 695 SMART tpr_5 583 616 IPR019734 GO:0005515
Bva11g01355 695 MobiDBLite consensus disorder prediction 14 28 - -
Bva11g01355 695 PANTHER PROTEIN NPG1 3 694 IPR043376 -
Bva11g01355 695 SUPERFAMILY TPR-like 498 683 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01355 Bva-Chr11 13656923 13661708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01355 4 695 Calmodulin-binding Proteins AT2G43040 73.132 0.0 1001
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01355 K21843 - qsu:112030109 1070.84