Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01351 ATGGCTGCAAATCTCACGGAAGGAGCAATAACATTTATGTGCAGGGACGATTTCTCTTCGGAGGATTTGAAACCGGTGCTCCAAGTAATCGACTTGAAGCTTGTGCAGGCCCAGCAGCATAGCGCCATGGAGAGGTATAGGCTTGTGCTTTCGGATGGTTCACATTATCAGCAAGGGATGCTCGCTACTCAGAAGAATGAATTAGTTCATGCCGGGAGGTTGCAGAAAGGCTCTGTCCTTAGATTAACACAGTTTATCTGTAATGCTGTCCAGAATCGCAAGATTATTATCATCATTGATCTGGATGTGGTGCTTGAAAAATGTGATCTGATTGGAGAACCTGCAGCAGCACCAAGAACTGGCCAATCAGGAGCCATTGCTGGATTTTCCCAGTCTATGAACAACACTTTACCTATAGCAAACGTTGCTAGAGCCACCGGCCCATCTCTAGATCCTCCAAAAGTGAATCATCCTTCCAATAATGCTTATCCTAGTGGTTCGGACCCTGTAAGATATGGTGGATCAAATGTAGCCTCTACTTTTGCTAGATCAGAGCCTGGAGCCAACATACCTAAGCCAATGCCATTAAGTGGGTCATATGATGATCAGAACAAGGGTTTTAGCAATCCCCAGTCAGAAACTTCAAGGCCATTGCAAAGTCGCCCACCACAGGCAATGTATCGACAGCCATCTCCAGTATACCCAAATAGAGGACCAATAGCAAGAAATGAAGCTCTGCCAAGAATAACTCCAATTGCTGCATTGAATCCATACCAGAATATGTGGACAATCAAGGCTAGAGTAACAGCAAAGGGAGAACTCAGGCACTACAATAATCCCAGAGGTGAGGGAaaagtgttttcttttgatcttCTTGACTCTGAACGTGGAGAAATTCGGGCAACTTGCTTTAATGCTGTCGCAGATCAGTTACTATCATCAACTTG 947 0.4424 MAANLTEGAITFMCRDDFSSEDLKPVLQVIDLKLVQAQQHSAMERYRLVLSDGSHYQQGMLATQKNELVHAGRLQKGSVLRLTQFICNAVQNRKIIIIIDLDVVLEKCDLIGEPAAAPRTGQSGAIAGFSQSMNNTLPIANVARATGPSLDPPKVNHPSNNAYPSGSDPVRYGGSNVASTFARSEPGANIPKPMPLSGSYDDQNKGFSNPQSETSRPLQSRPPQAMYRQPSPVYPNRGPIARNEALPRITPIAALNPYQNMWTIKARVTAKGELRHYNNPRGEGKVFSFDLLDSERGEIRATCFNAVADQLLSST 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01351 315 MobiDBLite consensus disorder prediction 153 183 - -
Bva11g01351 315 Gene3D - 247 314 IPR012340 -
Bva11g01351 315 MobiDBLite consensus disorder prediction 144 240 - -
Bva11g01351 315 CDD RPA1N 8 94 IPR007199 GO:0003677|GO:0005634|GO:0006260
Bva11g01351 315 CDD RPA1_DBD_A 251 311 - -
Bva11g01351 315 PANTHER REPLICATION PROTEIN A SUBUNIT 3 311 - -
Bva11g01351 315 PANTHER REPLICATION FACTOR A 1, RFA1 3 311 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bva11g01351 315 Gene3D - 3 117 IPR012340 -
Bva11g01351 315 Pfam Replication factor-A protein 1, N-terminal domain 5 105 IPR007199 GO:0003677|GO:0005634|GO:0006260
Bva11g01351 315 SUPERFAMILY Nucleic acid-binding proteins 1 112 IPR012340 -
Bva11g01351 315 MobiDBLite consensus disorder prediction 201 226 - -
Bva11g01351 315 SUPERFAMILY Nucleic acid-binding proteins 249 311 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01351 Bva-Chr11 13638332 13641511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01351 1 312 Core DNA Replication Machinery Family AT5G45400 40.489 1.36e-75 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01351 K07466 - jre:109004017 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01351 11 13638332 13641511 Bva11g01351 11 13638332 13641511 ECH