Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01343 ATGTTTACGTGCATAGCATGTACGAAGACGGATGATAGGGAAGAAGAAGGTGGAGGGCGTGAGAGTGGCACGCCGAGTACAAAAGAAACCGTCAAAAGCCTGACGACGCAGATAAAGGATATGGCTCTGAAGTTTTCAGGTGCTTATAAGCAATGCAAACCCTGCACAGGATCCAGTAGCTACAAGAAAGGACAGAGACCGTATCCAGACTTTGACACCATCTCGGAAGGGGTCCCATACCCATATTTTGGGGGTGCAAGCTCAAGTTCAACCCCTGCATGGGACTTTACAAGCTCCAACTACCCCGGCGGAAGATCCGACCCAAGATTTGCAGGAGCATTTGGTGGTGACCGAACCCCTAGAGGACGAGAATCAGCTTCAGCACTATCTTGTGATGTAGTTCTAGAAGACGAAGATGAGCCCAAAGAATGGATGGCACAGGTGGAACCAGGGGTCCATATTACTTTCGTGTCTCTTTCTAACGGGGGAAATGATCTTAAAAGAATTCGCTTCAGcCGAGATATGTTCAACAAGTGGCAAGCTCAAAGATGGTGGGGCGAGAATTATGACAGAATCATGGAGCTCTATAATGTTCAGAGATTCAATCGACAGGCTCTTCACACTCCTCCTAGGTCTGAGAGTGagCCAAGAGATTCTACTTACACAAGACTAGGCTCCCCAAGAGAGAGCCCCATGAACAAGGATTGGACACCAAGGCACCACTATAGACCCCCAGGATTCCACGCAGGGTCGAGTGCTTATGGGATGGGTGGTGCCAAAGAGGCATCATCCATGGAAGCATCACGGACAACGACCTCTTCTCGAGATGAACCTTCTATAAGCAATGCTAGTGAAATGGAAACAGAATGGGTTGAGCAAGATGAACCTGGGGTGTACATTACAATCAGACAGCTAGCTGATGGCACAAGGGAGCTCCGGCGTGTGAGATTTAGCCGGGAAAGATTTGGGGAGGTACCTGCCAAGAACTGGTGGGAGGAGAACAGAGAGAGAATACAAGCTCAATACCTTTG 1031 0.4879 MFTCIACTKTDDREEEGGGRESGTPSTKETVKSLTTQIKDMALKFSGAYKQCKPCTGSSSYKKGQRPYPDFDTISEGVPYPYFGGASSSSTPAWDFTSSNYPGGRSDPRFAGAFGGDRTPRGRESASALSCDVVLEDEDEPKEWMAQVEPGVHITFVSLSNGGNDLKRIRFSRDMFNKWQAQRWWGENYDRIMELYNVQRFNRQALHTPPRSESEPRDSTYTRLGSPRESPMNKDWTPRHHYRPPGFHAGSSAYGMGGAKEASSMEASRTTTSSRDEPSISNASEMETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVPAKNWWEENRERIQAQYL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01343 343 MobiDBLite consensus disorder prediction 264 287 - -
Bva11g01343 343 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
Bva11g01343 343 Pfam Transcription factor regulating root and shoot growth via Pin3 287 342 IPR013591 -
Bva11g01343 343 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
Bva11g01343 343 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 343 IPR044532 -
Bva11g01343 343 Pfam Transcription factor BRX N-terminal domain 22 55 IPR027988 -
Bva11g01343 343 MobiDBLite consensus disorder prediction 206 292 - -
Bva11g01343 343 ProSiteProfiles BRX domain profile. 288 343 IPR013591 -
Bva11g01343 343 MobiDBLite consensus disorder prediction 9 31 - -
Bva11g01343 343 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01343 Bva-Chr11 13602769 13609201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01343 1 343 Major Intrinsic Protein MIP AT1G31880 70.621 9.54e-173 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01343 - - gmx:100785003 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00942 08 4777963 4779679 Bva11g01343 11 13602769 13609201 BWGD
Bva11g01343 11 13602769 13609201 Bva11g01343 11 13602769 13609201 ECH