Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01341 ATGAGCGGTCCACCGATGTGGACGGCCACGCATCCACCGTTCACGGTGGCGCAATGGCAGGAGCTGGAACACCAAGCTCTCATTTTCAAATATCTCAAGGCTGGTTTGCCTGTTCCCCCTGACCTCCTCGCCCCCATTCGTAAGAGTTTCCAATTGATGTCCGCTAAGATCGTACATCACCCAGCTCTGGGTTATTGCTCCTATTTCGGGAAAAAGATAGACCCAGAACCGGGAAGGTGCCGGAGAACGGATGGCAAGAAGTGGAGGTGCTCCAGAGATGCACATCCGGACTCCAAGTACTGTGAGCGGCACATGATCCGCCGCCGCTACCGTTCAAGAAAGCCTGTGGAATCACAAGCTGCTCCTCAGTCTTCGTCCACTGTGGGATCAGAAGTTGCTAGTGGGAGCAGAAGTAGTAGCTGTGGAAGCTTCCCCAGCCTACCTTTGCACACTAATGGTACTCGCGAGGGTTTAAACCTTGGAAACAACGCATCTCAGCTGCAGATAGATTGTTTTCCCTCTGATGCTGGCAAGAAAGAGTACAgGTTTGCACTGAACTCTGAAGCAGATGAACACAGCTTCTTACAGAAAGGCTTGGGAAGTGTGCGTTACCCTGGTTTTGACTCTACATCAGATGGTATGTGGTCTCATATATCACAGATTCCCTCAAACTCCGTCACAGAATCCAGAAATAATTCTATTATGGTTAGCAACTCTCTCCAACTACGGACAATGCAAGATGCTGACCCATTGAATGTTGATGCTGCGAGGTCCAAACAACAACATATCTTTGATGGGCAGTTAAGTTCGGCAGGGTATTTGAAACAGGAACAACAGTCCCCTCAGAGTCTCTTCAGTGACTGGCAGTGGAAGAGGGATTTAGGCTCGTCTGCCATTCAGTACAGACCTAGTAAAGAGTCTAACTGCAACCCAGACATGAACGTTGATTTCCTCGGATCTTTATG 965 0.4922 MSGPPMWTATHPPFTVAQWQELEHQALIFKYLKAGLPVPPDLLAPIRKSFQLMSAKIVHHPALGYCSYFGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESQAAPQSSSTVGSEVASGSRSSSCGSFPSLPLHTNGTREGLNLGNNASQLQIDCFPSDAGKKEYRFALNSEADEHSFLQKGLGSVRYPGFDSTSDGMWSHISQIPSNSVTESRNNSIMVSNSLQLRTMQDADPLNVDAARSKQQHIFDGQLSSAGYLKQEQQSPQSLFSDWQWKRDLGSSAIQYRPSKESNCNPDMNVDFLGSL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01341 321 Pfam WRC 75 117 IPR014977 -
Bva11g01341 321 PANTHER - 1 316 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bva11g01341 321 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva11g01341 321 ProSiteProfiles WRC domain profile. 74 118 IPR014977 -
Bva11g01341 321 Pfam QLQ 13 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva11g01341 321 PANTHER GROWTH-REGULATING FACTOR 1 316 - -
Bva11g01341 321 MobiDBLite consensus disorder prediction 117 148 - -
Bva11g01341 321 MobiDBLite consensus disorder prediction 111 148 - -
Bva11g01341 321 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01341 Bva-Chr11 13593264 13595822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01341 1 117 GRF Transcription Factor Family AT3G13960 57.025 1.51e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bva11g01341 WRC 1.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01341 - - lja:Lj2g3v1537380.1 406.371