Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01336 ATGGAGAGGAGCTGTGGTGGTGCTGGAGGGCATTCGTACGAGAATGGGGTGGTGATGACGAGAGACCCGAAGCCGAGGCTGAGGTGGACGGCTGATCTTCACGACCGGTTTGTTGATGCCGTTACCAAACTTGGTGGCCCTGACAAAGCGACTCCCAAGTCTGTATTGAAACTAATGGGTTTGAAAGGTTTGACATTGTATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTCGAAAGCAAAACAGTGAGgaacaacaaaaagagaacaatACTAGAGTTTCATATTTAAGTTTCAGTGATCTTCCTACAGGGTTTAACACCAATTACAGAGTTGATAACGCAACAAGCGAAATGCCAATAGCAGAGGCACTGAGGCGACAGAATGAAGTTCAGAAGAGGTTAGGAGAGCAGCTAGagGTGCAGAAAAAACTAGAGATGAGAATAGAGGCACAGGGGAAATATTTGCAAGCCATGTTAGATAAAGCACAAAAGAGACTGACAGTTGATATGAACGGAGCAAGTGGTTTAGAAGAAGCGAGATCACAGTTGACGTACTTCAACTCTGCTTTGTCGAATTTCATGGACAACATGGATAAGGATGTAATATA 623 0.4302 MERSCGGAGGHSYENGVVMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLKLMGLKGLTLYHLKSHLQKYRLGQQARKQNSEEQQKENNTRFNTNYRVDNATSEMPIAEALRRQNEVQKRLGEQLEVQKKLEMRIEAQGKYLQAMLDKAQKRLTVDMNGASGLEEARSQLTYFNSALSNFMDNMDKDVI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01336 195 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 192 IPR044848 GO:0003700
Bva11g01336 195 Coils Coil 114 134 - -
Bva11g01336 195 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 24 79 IPR006447 GO:0003677
Bva11g01336 195 Pfam MYB-CC type transfactor, LHEQLE motif 111 157 IPR025756 -
Bva11g01336 195 Gene3D - 23 81 - -
Bva11g01336 195 SUPERFAMILY Homeodomain-like 24 81 IPR009057 -
Bva11g01336 195 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 192 - -
Bva11g01336 195 Pfam Myb-like DNA-binding domain 27 77 IPR001005 -
Bva11g01336 195 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 81 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01336 Bva-Chr11 13568187 13570053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01336 17 185 G2-like Transcription Factor Family AT3G24120 53.005 2.01e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva11g01336 Myb_DNA-binding 5.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01336 - - mnt:21405630 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01336 11 13568187 13570053 Bva11g01336 11 13568187 13570053 ECH